RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 MAVSQ7Z434 540 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 LIMS2Q7Z4I7 341 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 GLT6D1Q7Z4J2 308 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 OR4K2Q8NGD2 314 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 PIF1Q9H611 641 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 SCUBE2Q9NQ36 999 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 MKS1Q9NXB0 559 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 MARCH4Q9P2E8 410 aaPredicted RBP15.4■□□□□ 0.06
LMNB1-203ENST00000460265 TYW5A2RUC4 315 aaKnown RBP15.4■□□□□ 0.06
LMNB1-203ENST00000460265 CAPN14A8MX76 684 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 INHAP05111 366 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 RBP1P09455 135 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 NELFEP18615 380 aaKnown RBP15.4■□□□□ 0.06
LMNB1-203ENST00000460265 HDCP19113 662 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 TACR2P21452 398 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 C21orf59P57076 290 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 MYBPC1Q00872 1141 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 BHLHA9Q7RTU4 235 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 AHI1Q8N157 1196 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 TXNDC5Q8NBS9 432 aaKnown RBP15.4■□□□□ 0.06
LMNB1-203ENST00000460265 TSPAN14Q8NG11 270 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 TRPC4APQ8TEL6 797 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 IL12RB2Q99665 862 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 TTPALQ9BTX7 342 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 GPR63Q9BZJ6 419 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 TRPM5Q9NZQ8 1165 aa15.4■□□□□ 0.06
LMNB1-203ENST00000460265 KNL1Q8NG31 2342 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 LAMA2P24043 3122 aaKnown RBP15.39■□□□□ 0.05
LMNB1-203ENST00000460265 RGSL1A5PLK6 1076 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 CD3EAPO15446 510 aaKnown RBP15.39■□□□□ 0.05
LMNB1-203ENST00000460265 SNX2O60749 519 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 CYP11A1P05108 521 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 S100A1P23297 94 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 GLDCP23378 1020 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 POU4F1Q01851 419 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 PTGR2Q8N8N7 351 aaPredicted RBP15.39■□□□□ 0.05
LMNB1-203ENST00000460265 AUTS2Q8WXX7 1259 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 DNAJC28Q9NX36 388 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 EPS15L1Q9UBC2 864 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 UBA2Q9UBT2 640 aaPredicted RBP15.39■□□□□ 0.05
LMNB1-203ENST00000460265 AFF4Q9UHB7 1163 aaKnown RBP15.39■□□□□ 0.05
LMNB1-203ENST00000460265 RNF112Q9ULX5 631 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 SORCS3Q9UPU3 1222 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 SCML2Q9UQR0 700 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 BTRCQ9Y297 605 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 TRPC5OSA6NMA1 111 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 GOT2P00505 430 aaKnown RBP15.39■□□□□ 0.05
LMNB1-203ENST00000460265 PCYT1AP49585 367 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 PTK2BQ14289 1009 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 ZNF423Q2M1K9 1284 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 C16orf89Q6UX73 402 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 TAS1R1Q7RTX1 841 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 CENPLQ8N0S6 344 aaPredicted RBP15.39■□□□□ 0.05
LMNB1-203ENST00000460265 TMEM169Q96HH4 297 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 ZNF419Q96HQ0 510 aaPredicted RBP15.39■□□□□ 0.05
LMNB1-203ENST00000460265 TSGA13Q96PP4 275 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 WDR41Q9HAD4 459 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 TMA7Q9Y2S6 64 aaKnown RBP15.39■□□□□ 0.05
LMNB1-203ENST00000460265 V9GYQ6 96 aa15.39■□□□□ 0.05
LMNB1-203ENST00000460265 DENRO43583 198 aaKnown RBP15.38■□□□□ 0.05
LMNB1-203ENST00000460265 GJB5O95377 273 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 CTPS1P17812 591 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 MGAT3Q09327 533 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 BFSP2Q13515 415 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 RANBP10Q6VN20 620 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 ATG14Q6ZNE5 492 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 ZBTB46Q86UZ6 589 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 COLGALT2Q8IYK4 626 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 DEFB118Q96PH6 123 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 OLFM1Q99784 485 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 COPS7BQ9H9Q2 264 aaPredicted RBP15.38■□□□□ 0.05
LMNB1-203ENST00000460265 GIMAP2Q9UG22 337 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 AURKCQ9UQB9 309 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 POMPQ9Y244 141 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 MTMR11A4FU01 709 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 TMEM114B3SHH9 223 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 GSRP00390 522 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 NEK2P51955 445 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 SPIDRQ14159 915 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 VEPH1Q14D04 833 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 RBBP7Q16576 425 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 PTPRNQ16849 979 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 SMYD5Q6GMV2 418 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 EPGNQ6UW88 154 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 TPGS1Q6ZTW0 290 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 CUZD1Q86UP6 607 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 CLVS1Q8IUQ0 354 aaPredicted RBP15.38■□□□□ 0.05
LMNB1-203ENST00000460265 DSELQ8IZU8 1212 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 PQLC1Q8N2U9 271 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 PPP1R2P1Q96PQ5 205 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 DNMT3LQ9UJW3 386 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 MTF2Q9Y483 593 aaPredicted RBP15.38■□□□□ 0.05
LMNB1-203ENST00000460265 A0A1W2PQ45 241 aaPredicted RBP15.38■□□□□ 0.05
LMNB1-203ENST00000460265 A0A1W2PQY0 241 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 CCDC162PA2VCL2 907 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 C2orf81A6NN90 581 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 H2AFYO75367 372 aaKnown RBP15.38■□□□□ 0.05
LMNB1-203ENST00000460265 ZBTB11O95625 1053 aaPredicted RBP15.38■□□□□ 0.05
LMNB1-203ENST00000460265 CD1EP15812 388 aa15.38■□□□□ 0.05
LMNB1-203ENST00000460265 SELPP16109 830 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms