RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 PDE1CQ14123 709 aaPredicted RBP15.61■□□□□ 0.09
SDF4-204ENST00000459994 PRPSAP1Q14558 356 aa15.61■□□□□ 0.09
SDF4-204ENST00000459994 GRM3Q14832 879 aa15.61■□□□□ 0.09
SDF4-204ENST00000459994 FAM182AQ5T1J6 154 aa15.61■□□□□ 0.09
SDF4-204ENST00000459994 HES3Q5TGS1 186 aa15.61■□□□□ 0.09
SDF4-204ENST00000459994 DUPD1Q68J44 220 aa15.61■□□□□ 0.09
SDF4-204ENST00000459994 CAMK1DQ8IU85 385 aa15.61■□□□□ 0.09
SDF4-204ENST00000459994 RBFAQ8N0V3 343 aa15.61■□□□□ 0.09
SDF4-204ENST00000459994 GALNT15Q8N3T1 639 aa15.61■□□□□ 0.09
SDF4-204ENST00000459994 TP53I13Q8NBR0 393 aaPredicted RBP15.61■□□□□ 0.09
SDF4-204ENST00000459994 OR4C6Q8NH72 309 aa15.61■□□□□ 0.09
SDF4-204ENST00000459994 LENG8Q96PV6 779 aaPredicted RBP15.61■□□□□ 0.09
SDF4-204ENST00000459994 TRIM51Q9BSJ1 452 aa15.61■□□□□ 0.09
SDF4-204ENST00000459994 CPEB1Q9BZB8 566 aaKnown RBP15.61■□□□□ 0.09
SDF4-204ENST00000459994 CCDC86Q9H6F5 360 aaKnown RBP15.61■□□□□ 0.09
SDF4-204ENST00000459994 ETNK1Q9HBU6 452 aa15.61■□□□□ 0.09
SDF4-204ENST00000459994 NOD2Q9HC29 1040 aa15.61■□□□□ 0.09
SDF4-204ENST00000459994 SCUBE2Q9NQ36 999 aa15.61■□□□□ 0.09
SDF4-204ENST00000459994 RAB6BQ9NRW1 208 aa15.61■□□□□ 0.09
SDF4-204ENST00000459994 AAR2Q9Y312 384 aaKnown RBP15.61■□□□□ 0.09
SDF4-204ENST00000459994 UTP11Q9Y3A2 253 aaKnown RBP15.61■□□□□ 0.09
SDF4-204ENST00000459994 PCDHGA1Q9Y5H4 931 aa15.61■□□□□ 0.09
SDF4-204ENST00000459994 APC2O95996 2303 aa15.61■□□□□ 0.09
SDF4-204ENST00000459994 GOLGA6CA6NDK9 693 aa15.6■□□□□ 0.09
SDF4-204ENST00000459994 GOLGA6BA6NDN3 693 aa15.6■□□□□ 0.09
SDF4-204ENST00000459994 ERI2A8K979 691 aaKnown RBP15.6■□□□□ 0.09
SDF4-204ENST00000459994 NDC80O14777 642 aa15.6■□□□□ 0.09
SDF4-204ENST00000459994 MMP2P08253 660 aa15.6■□□□□ 0.09
SDF4-204ENST00000459994 GOLGA6DP0CG33 693 aa15.6■□□□□ 0.09
SDF4-204ENST00000459994 ACP1P24666 158 aa15.6■□□□□ 0.09
SDF4-204ENST00000459994 MAGEA6P43360 314 aa15.6■□□□□ 0.09
SDF4-204ENST00000459994 VPS41P49754 854 aa15.6■□□□□ 0.09
SDF4-204ENST00000459994 GEMP55040 296 aa15.6■□□□□ 0.09
SDF4-204ENST00000459994 MRPS25P82663 173 aaKnown RBP15.6■□□□□ 0.09
SDF4-204ENST00000459994 SKOR1P84550 965 aa15.6■□□□□ 0.09
SDF4-204ENST00000459994 SGCGQ13326 291 aa15.6■□□□□ 0.09
SDF4-204ENST00000459994 IHHQ14623 411 aa15.6■□□□□ 0.09
SDF4-204ENST00000459994 C19orf48Q6RUI8 117 aa15.6■□□□□ 0.09
SDF4-204ENST00000459994 SEC14L1Q92503 715 aa15.6■□□□□ 0.09
SDF4-204ENST00000459994 FUBP1Q96AE4 644 aaKnown RBP15.6■□□□□ 0.09
SDF4-204ENST00000459994 OXNAD1Q96HP4 312 aaPredicted RBP15.6■□□□□ 0.09
SDF4-204ENST00000459994 TUBGCP5Q96RT8 1024 aa15.6■□□□□ 0.09
SDF4-204ENST00000459994 GORASP1Q9BQQ3 440 aa15.6■□□□□ 0.09
SDF4-204ENST00000459994 EIF2B3Q9NR50 452 aaKnown RBP15.6■□□□□ 0.09
SDF4-204ENST00000459994 GOLGA6AQ9NYA3 693 aa15.6■□□□□ 0.09
SDF4-204ENST00000459994 DKK3Q9UBP4 350 aa15.6■□□□□ 0.09
SDF4-204ENST00000459994 FAM153AQ9UHL3 310 aa15.6■□□□□ 0.09
SDF4-204ENST00000459994 RAXQ9Y2V3 346 aa15.6■□□□□ 0.09
SDF4-204ENST00000459994 TSPAN11A1L157 253 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 DNALI1O14645 258 aaPredicted RBP15.59■□□□□ 0.09
SDF4-204ENST00000459994 FPGTO14772 594 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 HEXIM1O94992 359 aaKnown RBP15.59■□□□□ 0.09
SDF4-204ENST00000459994 CSF2P04141 144 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 CD86P42081 329 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 CDK16Q00536 496 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 INSM1Q01101 510 aaPredicted RBP15.59■□□□□ 0.09
SDF4-204ENST00000459994 SLC7A5Q01650 507 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 TARDBPQ13148 414 aaKnown RBP eCLIP15.59■□□□□ 0.09
SDF4-204ENST00000459994 MPP3Q13368 585 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 IRF4Q15306 451 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 TMEM52BQ4KMG9 183 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 TEX35Q5T0J7 233 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 KCTD16Q68DU8 428 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 KCTD11Q693B1 232 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 KDELC1Q6UW63 502 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 PCGF5Q86SE9 256 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 TMPRSS12Q86WS5 348 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 BBOF1Q8ND07 529 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 ZNF548Q8NEK5 533 aaPredicted RBP15.59■□□□□ 0.09
SDF4-204ENST00000459994 SPATA22Q8NHS9 363 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 CXorf40AQ8TE69 158 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 ASB12Q8WXK4 309 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 SNF8Q96H20 258 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 APOLD1Q96LR9 279 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 RBM15Q96T37 977 aaKnown RBP eCLIP15.59■□□□□ 0.09
SDF4-204ENST00000459994 MLPHQ9BV36 600 aaPredicted RBP15.59■□□□□ 0.09
SDF4-204ENST00000459994 SUV39H2Q9H5I1 410 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 PCDH12Q9NPG4 1184 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 DMGDHQ9UI17 866 aaKnown RBP15.59■□□□□ 0.09
SDF4-204ENST00000459994 DSPP15924 2871 aaKnown RBP15.59■□□□□ 0.09
SDF4-204ENST00000459994 ACACAQ13085 2346 aa15.59■□□□□ 0.09
SDF4-204ENST00000459994 K7ESM1 405 aa15.58■□□□□ 0.08
SDF4-204ENST00000459994 SMAPO00193 183 aa15.58■□□□□ 0.08
SDF4-204ENST00000459994 SOCS5O75159 536 aa15.58■□□□□ 0.08
SDF4-204ENST00000459994 TM7SF2O76062 418 aa15.58■□□□□ 0.08
SDF4-204ENST00000459994 SUN1O94901 812 aa15.58■□□□□ 0.08
SDF4-204ENST00000459994 MT-CYBP00156 380 aaPredicted RBP15.58■□□□□ 0.08
SDF4-204ENST00000459994 EPOP01588 193 aa15.58■□□□□ 0.08
SDF4-204ENST00000459994 CELA2BP08218 269 aaPredicted RBP15.58■□□□□ 0.08
SDF4-204ENST00000459994 NME1P15531 152 aaKnown RBP15.58■□□□□ 0.08
SDF4-204ENST00000459994 GM2AP17900 193 aa15.58■□□□□ 0.08
SDF4-204ENST00000459994 TPSB2P20231 275 aa15.58■□□□□ 0.08
SDF4-204ENST00000459994 CA4P22748 312 aa15.58■□□□□ 0.08
SDF4-204ENST00000459994 RPL21P46778 160 aaKnown RBP15.58■□□□□ 0.08
SDF4-204ENST00000459994 RABIFP47224 123 aa15.58■□□□□ 0.08
SDF4-204ENST00000459994 BASP1P80723 227 aaKnown RBP15.58■□□□□ 0.08
SDF4-204ENST00000459994 C1orf61Q13536 156 aa15.58■□□□□ 0.08
SDF4-204ENST00000459994 TPSAB1Q15661 275 aa15.58■□□□□ 0.08
SDF4-204ENST00000459994 UGP2Q16851 508 aa15.58■□□□□ 0.08
SDF4-204ENST00000459994 KCTD19Q17RG1 926 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms