RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 CCDC188H7C350 402 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 CDX4O14627 284 aaPredicted RBP12.78□□□□□ -0.36
COL18A1-206ENST00000459895 MYCLP1P12525 358 aaPredicted RBP12.78□□□□□ -0.36
COL18A1-206ENST00000459895 TPSB2P20231 275 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 EPHA8P29322 1005 aaPredicted RBP12.78□□□□□ -0.36
COL18A1-206ENST00000459895 HOXD11P31277 338 aaPredicted RBP12.78□□□□□ -0.36
COL18A1-206ENST00000459895 CCT8P50990 548 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 THOP1P52888 689 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 ATXN3P54252 364 aaPredicted RBP12.78□□□□□ -0.36
COL18A1-206ENST00000459895 CDK3Q00526 305 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 DR1Q01658 176 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 DPTQ07507 201 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 PTPRCAPQ14761 206 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 NFATC4Q14934 902 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 PPP1R7Q15435 360 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 SHBQ15464 509 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 TPSAB1Q15661 275 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 HLA-BQ31612 363 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 C4orf22Q6V702 233 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 PPP1R21Q6ZMI0 780 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 ZNF572Q7Z3I7 529 aaPredicted RBP12.78□□□□□ -0.36
COL18A1-206ENST00000459895 JAMLQ86YT9 394 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 GPR161Q8N6U8 529 aaKnown RBP12.78□□□□□ -0.36
COL18A1-206ENST00000459895 CPT1BQ92523 772 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 LGR4Q9BXB1 951 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 FGF22Q9HCT0 170 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 CASS4Q9NQ75 786 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.78□□□□□ -0.36
COL18A1-206ENST00000459895 RNF14Q9UBS8 474 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 ASIC3Q9UHC3 531 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 KCTD3Q9Y597 815 aa12.78□□□□□ -0.36
COL18A1-206ENST00000459895 GON4LQ3T8J9 2241 aa12.77□□□□□ -0.36
COL18A1-206ENST00000459895 SPTY2D1-AS1A0A0U1RR47 76 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 CCDC78A2IDD5 438 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 KIF2AO00139 706 aaPredicted RBP12.77□□□□□ -0.37
COL18A1-206ENST00000459895 CCL22O00626 93 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 GAPDHSO14556 408 aaPredicted RBP12.77□□□□□ -0.37
COL18A1-206ENST00000459895 TTI1O43156 1089 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 PSMD3O43242 534 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 FOXD2O60548 495 aaPredicted RBP12.77□□□□□ -0.37
COL18A1-206ENST00000459895 MAGEC1O60732 1142 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 SDC3O75056 442 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 URI1O94763 535 aaPredicted RBP12.77□□□□□ -0.37
COL18A1-206ENST00000459895 TPH1P17752 444 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 HMGCLP35914 325 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 SPAM1P38567 509 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 MAGEA6P43360 314 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 CDH17Q12864 832 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 TAF1AQ15573 450 aaPredicted RBP12.77□□□□□ -0.37
COL18A1-206ENST00000459895 ZNF542PQ5EBM4 170 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 PRAMEF14Q5SWL7 426 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 STPG1Q5TH74 334 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 PNCKQ6P2M8 343 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 IL27RAQ6UWB1 636 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 FAM151BQ6UXP7 276 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 ADAMTSL4Q6UY14 1074 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 LINC00523Q86TU6 105 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 NRSN1Q8IZ57 195 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 RBFAQ8N0V3 343 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 SPATA4Q8NEY3 305 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 OR13C4Q8NGS5 318 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 FAM174AQ8TBP5 190 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 PTCD2Q8WV60 388 aaKnown RBP12.77□□□□□ -0.37
COL18A1-206ENST00000459895 SKA1Q96BD8 255 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 DNAJC1Q96KC8 554 aaKnown RBP12.77□□□□□ -0.37
COL18A1-206ENST00000459895 PLEKHG4BQ96PX9 1271 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 SRPK1Q96SB4 655 aaKnown RBP12.77□□□□□ -0.37
COL18A1-206ENST00000459895 KRT12Q99456 494 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 ELF4Q99607 663 aaPredicted RBP12.77□□□□□ -0.37
COL18A1-206ENST00000459895 APOOQ9BUR5 198 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 DNAAF2Q9NVR5 837 aaKnown RBP12.77□□□□□ -0.37
COL18A1-206ENST00000459895 IL17CQ9P0M4 197 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 FEZ2Q9UHY8 353 aaPredicted RBP12.77□□□□□ -0.37
COL18A1-206ENST00000459895 FKBPLQ9UIM3 349 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 MRFAP1Q9Y605 127 aa12.77□□□□□ -0.37
COL18A1-206ENST00000459895 PIEZO1Q92508 2521 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 A0A1B0GTQ1 180 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 TMEM202A6NGA9 273 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 C4orf47A7E2U8 309 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 CACNB4O00305 520 aaPredicted RBP12.76□□□□□ -0.37
COL18A1-206ENST00000459895 INPP4BO15327 924 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 LDB2O43679 373 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 NME1P15531 152 aaKnown RBP12.76□□□□□ -0.37
COL18A1-206ENST00000459895 TEAD1P28347 426 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 GPR1P46091 355 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 LIMK1P53667 647 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 YPEL5P62699 121 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 MRPS25P82663 173 aaKnown RBP12.76□□□□□ -0.37
COL18A1-206ENST00000459895 CKAP4Q07065 602 aaKnown RBP12.76□□□□□ -0.37
COL18A1-206ENST00000459895 EIF2B5Q13144 721 aaKnown RBP12.76□□□□□ -0.37
COL18A1-206ENST00000459895 ALG11Q2TAA5 492 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 CCDC38Q502W7 563 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 CERCAMQ5T4B2 595 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 DOK6Q6PKX4 331 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 RAVER1Q8IY67 606 aaKnown RBP12.76□□□□□ -0.37
COL18A1-206ENST00000459895 DNAAF3Q8N9W5 541 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 NETO1Q8TDF5 533 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 OR1E3Q8WZA6 343 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 WDR92Q96MX6 357 aa12.76□□□□□ -0.37
COL18A1-206ENST00000459895 RUNDC3BQ96NL0 473 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms