RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 DPYSL2Q16555 572 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 PPP6R3Q5H9R7 873 aaPredicted RBP10.39□□□□□ -0.75
HDLBP-227ENST00000458564 DCAF12Q5T6F0 453 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 RAET1GQ6H3X3 334 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 TMEM71Q6P5X7 295 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 CLEC18BQ6UXF7 455 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 ADAMTSL4Q6UY14 1074 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 RBM43Q6ZSC3 357 aaKnown RBP10.39□□□□□ -0.75
HDLBP-227ENST00000458564 Q6ZVL8 140 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 USP45Q70EL2 814 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 ZNF765Q7L2R6 523 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 TECPR1Q7Z6L1 1165 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 NLRP8Q86W28 1048 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 TP53INP2Q8IXH6 220 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 CACNA2D3Q8IZS8 1091 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 PGBD5Q8N414 524 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 SFRP1Q8N474 314 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 CLEC18CQ8NCF0 446 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 OR2M4Q96R27 311 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 SPRY4Q9C004 299 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 EPN3Q9H201 632 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 SUDS3Q9H7L9 328 aaPredicted RBP10.39□□□□□ -0.75
HDLBP-227ENST00000458564 ZWILCHQ9H900 591 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 NOD2Q9HC29 1040 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 FANCLQ9NW38 375 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 SLC39A1Q9NY26 324 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 KCNK4Q9NYG8 393 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 TAS2R14Q9NYV8 317 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 CWC15Q9P013 229 aaKnown RBP10.39□□□□□ -0.75
HDLBP-227ENST00000458564 PCSK1NQ9UHG2 260 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 ANAPC2Q9UJX6 822 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 MYO6Q9UM54 1294 aa10.39□□□□□ -0.75
HDLBP-227ENST00000458564 USP9YO00507 2555 aaPredicted RBP10.39□□□□□ -0.75
HDLBP-227ENST00000458564 MAFKO60675 156 aa10.38□□□□□ -0.75
HDLBP-227ENST00000458564 PYGLP06737 847 aa10.38□□□□□ -0.75
HDLBP-227ENST00000458564 PCK1P35558 622 aa10.38□□□□□ -0.75
HDLBP-227ENST00000458564 CCR10P46092 362 aa10.38□□□□□ -0.75
HDLBP-227ENST00000458564 POLD2P49005 469 aa10.38□□□□□ -0.75
HDLBP-227ENST00000458564 FOXK1P85037 733 aa10.38□□□□□ -0.75
HDLBP-227ENST00000458564 UBXN1Q04323 297 aa10.38□□□□□ -0.75
HDLBP-227ENST00000458564 CRTC2Q53ET0 693 aaPredicted RBP10.38□□□□□ -0.75
HDLBP-227ENST00000458564 PYCR3Q53H96 274 aa10.38□□□□□ -0.75
HDLBP-227ENST00000458564 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.38□□□□□ -0.75
HDLBP-227ENST00000458564 NKAIN2Q5VXU1 208 aa10.38□□□□□ -0.75
HDLBP-227ENST00000458564 WDR74Q6RFH5 385 aaPredicted RBP10.38□□□□□ -0.75
HDLBP-227ENST00000458564 APTXQ7Z2E3 356 aaKnown RBP10.38□□□□□ -0.75
HDLBP-227ENST00000458564 IRF2BP2Q7Z5L9 587 aa10.38□□□□□ -0.75
HDLBP-227ENST00000458564 TSPAN33Q86UF1 283 aa10.38□□□□□ -0.75
HDLBP-227ENST00000458564 RAVER1Q8IY67 606 aaKnown RBP10.38□□□□□ -0.75
HDLBP-227ENST00000458564 BBS5Q8N3I7 341 aa10.38□□□□□ -0.75
HDLBP-227ENST00000458564 ANKRD20A12PQ8NF67 263 aa10.38□□□□□ -0.75
HDLBP-227ENST00000458564 SLC37A2Q8TED4 501 aa10.38□□□□□ -0.75
HDLBP-227ENST00000458564 PDCD6IPQ8WUM4 868 aaKnown RBP10.38□□□□□ -0.75
HDLBP-227ENST00000458564 RTP4Q96DX8 246 aa10.38□□□□□ -0.75
HDLBP-227ENST00000458564 PCMTD1Q96MG8 357 aaPredicted RBP10.38□□□□□ -0.75
HDLBP-227ENST00000458564 ZPBPQ9BS86 351 aa10.38□□□□□ -0.75
HDLBP-227ENST00000458564 EFHD1Q9BUP0 239 aa10.38□□□□□ -0.75
HDLBP-227ENST00000458564 TRIM7Q9C029 511 aa10.38□□□□□ -0.75
HDLBP-227ENST00000458564 OCIAD1Q9NX40 245 aa10.38□□□□□ -0.75
HDLBP-227ENST00000458564 CHMP5Q9NZZ3 219 aa10.38□□□□□ -0.75
HDLBP-227ENST00000458564 TMEM9Q9P0T7 183 aa10.38□□□□□ -0.75
HDLBP-227ENST00000458564 ANKMY1Q9P2S6 941 aa10.38□□□□□ -0.75
HDLBP-227ENST00000458564 NBPF19A0A087WUL8 3843 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 TTC24A2A3L6 582 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-227ENST00000458564 EFCAB7A8K855 629 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 H3BRJ5 948 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 ATMINO43313 823 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-227ENST00000458564 DUX1O43812 170 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 FZD6O60353 706 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 NTRK1P04629 796 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 GZMAP12544 262 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 ZNF30P17039 623 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 MAP4P27816 1152 aaKnown RBP10.37□□□□□ -0.75
HDLBP-227ENST00000458564 MAN1A1P33908 653 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 GPR1P46091 355 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 CDH6P55285 790 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 MC2RQ01718 297 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 MYL5Q02045 173 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 CDC20Q12834 499 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 ARMC12Q5T9G4 340 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 LRRC66Q68CR7 880 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 DENND2CQ68D51 928 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 ANKS6Q68DC2 871 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 TMCO3Q6UWJ1 677 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 ARHGAP22Q7Z5H3 698 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 POLNQ7Z5Q5 900 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 FAM129CQ86XR2 697 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 PTRH1Q86Y79 214 aaKnown RBP10.37□□□□□ -0.75
HDLBP-227ENST00000458564 NLGN4XQ8N0W4 816 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 NLGN4YQ8NFZ3 816 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-227ENST00000458564 OR10G6Q8NH81 332 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 PIH1D2Q8WWB5 315 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 KIAA1143Q96AT1 154 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-227ENST00000458564 COX14Q96I36 57 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 ABCG8Q9H221 673 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 SARS2Q9NP81 518 aaKnown RBP10.37□□□□□ -0.75
HDLBP-227ENST00000458564 VPS18Q9P253 973 aa10.37□□□□□ -0.75
HDLBP-227ENST00000458564 TMEM184BQ9Y519 407 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-227ENST00000458564 USP9XQ93008 2570 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-227ENST00000458564 SPTAN1Q13813 2472 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms