RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 MSRB2Q9Y3D2 182 aa18.63■□□□□ 0.57
USP39-209ENST00000458268 ZNF711Q9Y462 761 aa18.63■□□□□ 0.57
USP39-209ENST00000458268 CSNK1G3Q9Y6M4 447 aa18.63■□□□□ 0.57
USP39-209ENST00000458268 PRSS38A1L453 326 aa18.62■□□□□ 0.57
USP39-209ENST00000458268 NDST3O95803 873 aa18.62■□□□□ 0.57
USP39-209ENST00000458268 JUPP14923 745 aa18.62■□□□□ 0.57
USP39-209ENST00000458268 PTPN7P35236 360 aa18.62■□□□□ 0.57
USP39-209ENST00000458268 TRIM23P36406 574 aa18.62■□□□□ 0.57
USP39-209ENST00000458268 DUSP3P51452 185 aaPredicted RBP18.62■□□□□ 0.57
USP39-209ENST00000458268 WNT3AP56704 352 aa18.62■□□□□ 0.57
USP39-209ENST00000458268 XRCC4Q13426 336 aa18.62■□□□□ 0.57
USP39-209ENST00000458268 HES3Q5TGS1 186 aa18.62■□□□□ 0.57
USP39-209ENST00000458268 GUSBP11Q6P575 273 aa18.62■□□□□ 0.57
USP39-209ENST00000458268 EFL1Q7Z2Z2 1120 aaKnown RBP18.62■□□□□ 0.57
USP39-209ENST00000458268 GKN2Q86XP6 184 aa18.62■□□□□ 0.57
USP39-209ENST00000458268 GALNT15Q8N3T1 639 aa18.62■□□□□ 0.57
USP39-209ENST00000458268 TAB3Q8N5C8 712 aaPredicted RBP18.62■□□□□ 0.57
USP39-209ENST00000458268 RNF10Q8N5U6 811 aaKnown RBP18.62■□□□□ 0.57
USP39-209ENST00000458268 IFI44Q8TCB0 444 aa18.62■□□□□ 0.57
USP39-209ENST00000458268 GLMNQ92990 594 aa18.62■□□□□ 0.57
USP39-209ENST00000458268 TRIB3Q96RU7 358 aa18.62■□□□□ 0.57
USP39-209ENST00000458268 VAT1Q99536 393 aa18.62■□□□□ 0.57
USP39-209ENST00000458268 FSD1LQ9BXM9 530 aa18.62■□□□□ 0.57
USP39-209ENST00000458268 TMEM168Q9H0V1 697 aa18.62■□□□□ 0.57
USP39-209ENST00000458268 ZFYVE1Q9HBF4 777 aa18.62■□□□□ 0.57
USP39-209ENST00000458268 GPR34Q9UPC5 381 aa18.62■□□□□ 0.57
USP39-209ENST00000458268 PCDHGA1Q9Y5H4 931 aa18.62■□□□□ 0.57
USP39-209ENST00000458268 MYLKQ15746 1914 aa18.62■□□□□ 0.57
USP39-209ENST00000458268 CHD8Q9HCK8 2581 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 B4DGG1 531 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 LMO7DNF2Z398 122 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 CKMT1AP12532 417 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 ACP1P24666 158 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 CHRNA4P43681 627 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 NR0B2Q15466 257 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 C6orf132Q5T0Z8 1188 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 ITPRIPL1Q6GPH6 555 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 SLC35F3Q8IY50 421 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 KYQ8NBH2 561 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 CCL4L1Q8NHW4 92 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 CCDC110Q8TBZ0 833 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 PTCD2Q8WV60 388 aaKnown RBP18.61■□□□□ 0.57
USP39-209ENST00000458268 OXNAD1Q96HP4 312 aaPredicted RBP18.61■□□□□ 0.57
USP39-209ENST00000458268 ALS2CR12Q96Q35 445 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 APOL2Q9BQE5 337 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 FICDQ9BVA6 458 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 SPATA16Q9BXB7 569 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 TEX101Q9BY14 249 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 ABCG4Q9H172 646 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 BPIFA1Q9NP55 256 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 ARFGAP3Q9NP61 516 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 TRHDEQ9UKU6 1024 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 EFR3BQ9Y2G0 817 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 GPSM3Q9Y4H4 160 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 SPO11Q9Y5K1 396 aa18.61■□□□□ 0.57
USP39-209ENST00000458268 TPRP12270 2363 aaKnown RBP18.61■□□□□ 0.57
USP39-209ENST00000458268 LY6G6EA0A0G2JKS1 128 aa18.6■□□□□ 0.57
USP39-209ENST00000458268 PSMB4P28070 264 aa18.6■□□□□ 0.57
USP39-209ENST00000458268 SPINT3P49223 89 aa18.6■□□□□ 0.57
USP39-209ENST00000458268 RPIAP49247 311 aa18.6■□□□□ 0.57
USP39-209ENST00000458268 CCZ1BP86790 482 aa18.6■□□□□ 0.57
USP39-209ENST00000458268 CCZ1P86791 482 aaPredicted RBP18.6■□□□□ 0.57
USP39-209ENST00000458268 ST3GAL2Q16842 350 aa18.6■□□□□ 0.57
USP39-209ENST00000458268 ANKRD20A2Q5SQ80 823 aa18.6■□□□□ 0.57
USP39-209ENST00000458268 ANKRD20A1Q5TYW2 823 aa18.6■□□□□ 0.57
USP39-209ENST00000458268 ANKRD20A3Q5VUR7 823 aa18.6■□□□□ 0.57
USP39-209ENST00000458268 KDELC1Q6UW63 502 aa18.6■□□□□ 0.57
USP39-209ENST00000458268 TMPRSS7Q7RTY8 843 aa18.6■□□□□ 0.57
USP39-209ENST00000458268 CBARPQ8N350 705 aaPredicted RBP18.6■□□□□ 0.57
USP39-209ENST00000458268 FAM46DQ8NEK8 389 aa18.6■□□□□ 0.57
USP39-209ENST00000458268 MAPK15Q8TD08 544 aa18.6■□□□□ 0.57
USP39-209ENST00000458268 BLOC1S5Q8TDH9 187 aa18.6■□□□□ 0.57
USP39-209ENST00000458268 HES6Q96HZ4 224 aa18.6■□□□□ 0.57
USP39-209ENST00000458268 FCRL5Q96RD9 977 aa18.6■□□□□ 0.57
USP39-209ENST00000458268 GBA3Q9H227 469 aa18.6■□□□□ 0.57
USP39-209ENST00000458268 FAM83DQ9H4H8 585 aa18.6■□□□□ 0.57
USP39-209ENST00000458268 SUFUQ9UMX1 484 aa18.6■□□□□ 0.57
USP39-209ENST00000458268 R3HDM2Q9Y2K5 976 aaKnown RBP18.6■□□□□ 0.57
USP39-209ENST00000458268 U3KQA8 63 aa18.6■□□□□ 0.57
USP39-209ENST00000458268 CEP295Q9C0D2 2601 aa18.59■□□□□ 0.57
USP39-209ENST00000458268 TCRBV7S2A1N4TA0A589 114 aa18.59■□□□□ 0.57
USP39-209ENST00000458268 TPP1O14773 563 aa18.59■□□□□ 0.57
USP39-209ENST00000458268 BUD23O43709 281 aaKnown RBP18.59■□□□□ 0.57
USP39-209ENST00000458268 DKK1O94907 266 aa18.59■□□□□ 0.57
USP39-209ENST00000458268 SOD1P00441 154 aa18.59■□□□□ 0.57
USP39-209ENST00000458268 ATP1A1P05023 1023 aaKnown RBP18.59■□□□□ 0.57
USP39-209ENST00000458268 CEACAM5P06731 702 aa18.59■□□□□ 0.57
USP39-209ENST00000458268 GEMP55040 296 aa18.59■□□□□ 0.57
USP39-209ENST00000458268 DPTQ07507 201 aa18.59■□□□□ 0.57
USP39-209ENST00000458268 PRPSAP1Q14558 356 aa18.59■□□□□ 0.57
USP39-209ENST00000458268 SIRPB2Q5JXA9 342 aa18.59■□□□□ 0.57
USP39-209ENST00000458268 ADAMTSL4Q6UY14 1074 aa18.59■□□□□ 0.57
USP39-209ENST00000458268 ZNF765Q7L2R6 523 aa18.59■□□□□ 0.57
USP39-209ENST00000458268 NRSN1Q8IZ57 195 aa18.59■□□□□ 0.57
USP39-209ENST00000458268 HIC2Q96JB3 615 aa18.59■□□□□ 0.57
USP39-209ENST00000458268 MRGPRX2Q96LB1 330 aa18.59■□□□□ 0.57
USP39-209ENST00000458268 LYSMD1Q96S90 227 aa18.59■□□□□ 0.57
USP39-209ENST00000458268 DPEP2Q9H4A9 486 aa18.59■□□□□ 0.57
USP39-209ENST00000458268 DGKBQ9Y6T7 804 aa18.59■□□□□ 0.57
USP39-209ENST00000458268 ACACBO00763 2458 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms