RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 FAM98BQ52LJ0 330 aaKnown RBP5.45□□□□□ -1.54
VPS41-209ENST00000457055 FIGNQ5HY92 759 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 ATAD3BQ5T9A4 648 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 DEPDC1Q5TB30 811 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 ANKRD20A3Q5VUR7 823 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 IGFL4Q6B9Z1 124 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 SIGIRRQ6IA17 410 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 TIGD7Q6NT04 549 aaPredicted RBP5.45□□□□□ -1.54
VPS41-209ENST00000457055 FOXR2Q6PJQ5 311 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 ZNF813Q6ZN06 617 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 PHLDB2Q86SQ0 1253 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 KBTBD6Q86V97 674 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 CCDC25Q86WR0 208 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 HERC6Q8IVU3 1022 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 CSGALNACT2Q8N6G5 542 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 SCAIQ8N9R8 606 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 POMGNT2Q8NAT1 580 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 ZNF680Q8NEM1 530 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 OR8K5Q8NH50 307 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 LMBR1Q8WVP7 490 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 IFT81Q8WYA0 676 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 DPF1Q92782 380 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 MASTLQ96GX5 879 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 MAGED4Q96JG8 741 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 NSMCE2Q96MF7 247 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 KCNK16Q96T55 309 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 PLA2G12BQ9BX93 195 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 MOV10L1Q9BXT6 1211 aaKnown RBP5.45□□□□□ -1.54
VPS41-209ENST00000457055 IFIH1Q9BYX4 1025 aaKnown RBP5.45□□□□□ -1.54
VPS41-209ENST00000457055 ZDHHC5Q9C0B5 715 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 SLC5A7Q9GZV3 580 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 PRDM13Q9H4Q3 707 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 ATP13A3Q9H7F0 1226 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 COQ10BQ9H8M1 238 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 NEK6Q9HC98 313 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 CABP5Q9NP86 173 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 KLC4Q9NSK0 619 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 CATSPERZQ9NTU4 200 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 COPG2Q9UBF2 871 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 CAPN11Q9UMQ6 739 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 USP16Q9Y5T5 823 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 GPR45Q9Y5Y3 372 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 NAIPQ13075 1403 aa5.45□□□□□ -1.54
VPS41-209ENST00000457055 NEXMIFQ5QGS0 1516 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 A0A087WUV0 522 aaPredicted RBP5.44□□□□□ -1.54
VPS41-209ENST00000457055 A0A0A6YYJ9 748 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 CCDC144AA2RUR9 1427 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 PRAMEF25A6NGN4 478 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 OR6C75A6NL08 312 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 A8MV72 311 aaPredicted RBP5.44□□□□□ -1.54
VPS41-209ENST00000457055 AHRRA9YTQ3 701 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 KIF28PB7ZC32 967 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 PRR23D1E9PI22 279 aaPredicted RBP5.44□□□□□ -1.54
VPS41-209ENST00000457055 FAM86B1E9PN63 330 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 SLCO1B7G3V0H7 640 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 MAN2B1O00754 1011 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 MEIS2O14770 477 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 WNT9AO14904 365 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 PCDH17O14917 1159 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 KIAA0355O15063 1070 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 ABCC5O15440 1437 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 ARHGAP6O43182 974 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 GATCO43716 136 aaKnown RBP5.44□□□□□ -1.54
VPS41-209ENST00000457055 AKR7A3O95154 331 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 SPDEFO95238 335 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 CSF1P09603 554 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 PRR23D2P0DMB1 279 aaPredicted RBP5.44□□□□□ -1.54
VPS41-209ENST00000457055 MYF5P13349 255 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 CKMT2P17540 419 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 EIF2S2P20042 333 aaKnown RBP5.44□□□□□ -1.54
VPS41-209ENST00000457055 PTGS1P23219 599 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 RPA1P27694 616 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 GCH1P30793 250 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 SLC7A1P30825 629 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 CORO1AP31146 461 aaKnown RBP5.44□□□□□ -1.54
VPS41-209ENST00000457055 MDH1P40925 334 aaKnown RBP5.44□□□□□ -1.54
VPS41-209ENST00000457055 GARSP41250 739 aaKnown RBP5.44□□□□□ -1.54
VPS41-209ENST00000457055 CRKLP46109 303 aaKnown RBP5.44□□□□□ -1.54
VPS41-209ENST00000457055 CAPZA2P47755 286 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 ALDH7A1P49419 539 aaKnown RBP5.44□□□□□ -1.54
VPS41-209ENST00000457055 FXR1P51114 621 aaKnown RBP eCLIP5.44□□□□□ -1.54
VPS41-209ENST00000457055 CCR5P51681 352 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 PSMC5P62195 406 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 HERVK_113P62684 666 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 CHRNDQ07001 517 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 PTK6Q13882 451 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 NFYCQ13952 458 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 KLHL38Q2WGJ6 581 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 LEXMQ3ZCV2 418 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 GPAT3Q53EU6 434 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 SGO1Q5FBB7 561 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 NHSL2Q5HYW2 709 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 C10orf120Q5SQS8 335 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 RIPPLY2Q5TAB7 128 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 GARNL3Q5VVW2 1013 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 RRAGBQ5VZM2 374 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 FAM122CQ6P4D5 195 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 NFRKBQ6P4R8 1299 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 LAYNQ6UX15 382 aa5.44□□□□□ -1.54
VPS41-209ENST00000457055 SLC30A10Q6XR72 485 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms