RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 ZFYVE1Q9HBF4 777 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 PAK5Q9P286 719 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 SHOC2Q9UQ13 582 aa10.04□□□□□ -0.8
ATG4A-206ENST00000457035 LRP4O75096 1905 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 PLXNB3Q9ULL4 1909 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 SPTY2D1-AS1A0A0U1RR47 76 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 RGSL1A5PLK6 1076 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 GOLGA6CA6NDK9 693 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 GOLGA6BA6NDN3 693 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 A6NNZ2 444 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 ERI2A8K979 691 aaKnown RBP10.03□□□□□ -0.8
ATG4A-206ENST00000457035 K7ESM1 405 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 TOR1BO14657 336 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 SLC30A4O14863 429 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 MAGEC1O60732 1142 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 USP12O75317 370 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 KRT37O76014 449 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 SUN1O94901 812 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 GOLGA6DP0CG33 693 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 HMGCLP35914 325 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 RABIFP47224 123 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 FNTAP49354 379 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 C21orf59P57076 290 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 YPEL5P62699 121 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 SEMA5AQ13591 1074 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 ZNF423Q2M1K9 1284 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 PRAMEF14Q5SWL7 426 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 ESRP1Q6NXG1 681 aaKnown RBP10.03□□□□□ -0.8
ATG4A-206ENST00000457035 IL27RAQ6UWB1 636 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 C4orf22Q6V702 233 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 NRSN1Q8IZ57 195 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 SLC22A18ASQ8N1D0 253 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 TTC30BQ8N4P2 665 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 MINDY1Q8N5J2 469 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 OR2I1PQ8NGU4 316 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 CCHCR1Q8TD31 782 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 SCAMP4Q969E2 229 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 FUBP1Q96AE4 644 aaKnown RBP10.03□□□□□ -0.8
ATG4A-206ENST00000457035 NUS1Q96E22 293 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 C16orf45Q96MC5 204 aaPredicted RBP10.03□□□□□ -0.8
ATG4A-206ENST00000457035 APOOQ9BUR5 198 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 TRABDQ9H4I3 376 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 GAREM1Q9H706 876 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 LRRC40Q9H9A6 602 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 ERVMER34-1Q9H9K5 563 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 IL21RQ9HBE5 538 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 RAB6BQ9NRW1 208 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 DNAAF2Q9NVR5 837 aaKnown RBP10.03□□□□□ -0.8
ATG4A-206ENST00000457035 GOLGA6AQ9NYA3 693 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 HACD3Q9P035 362 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 PCYOX1Q9UHG3 505 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 FEZ2Q9UHY8 353 aaPredicted RBP10.03□□□□□ -0.8
ATG4A-206ENST00000457035 ZNF711Q9Y462 761 aa10.03□□□□□ -0.8
ATG4A-206ENST00000457035 RP1P56715 2156 aa10.02□□□□□ -0.8
ATG4A-206ENST00000457035 NCOR2Q9Y618 2525 aa10.02□□□□□ -0.8
ATG4A-206ENST00000457035 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.02□□□□□ -0.81
ATG4A-206ENST00000457035 GOLGA6L10A0A0M3HER8 536 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 C4orf47A7E2U8 309 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 TM4SF5O14894 197 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 SOD1P00441 154 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 KRT14P02533 472 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 TUBB4AP04350 444 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 PCCBP05166 539 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 ADRB1P08588 477 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 HOXC4P09017 264 aaPredicted RBP10.02□□□□□ -0.81
ATG4A-206ENST00000457035 BPIP17213 487 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 TEAD1P28347 426 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 GRIA1P42261 906 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 PAFAH1B1P43034 410 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 PTGIRP43119 386 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 TNNT3P45378 269 aaPredicted RBP10.02□□□□□ -0.81
ATG4A-206ENST00000457035 RXRGP48443 463 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 LIMK1P53667 647 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 MTM1Q13496 603 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 PDE1CQ14123 709 aaPredicted RBP10.02□□□□□ -0.81
ATG4A-206ENST00000457035 FZD2Q14332 565 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 SHBQ15464 509 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 TRIP13Q15645 432 aaPredicted RBP10.02□□□□□ -0.81
ATG4A-206ENST00000457035 STPG1Q5TH74 334 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 DBX2Q6ZNG2 339 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 ZNF765Q7L2R6 523 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 PTAR1Q7Z6K3 402 aaPredicted RBP10.02□□□□□ -0.81
ATG4A-206ENST00000457035 GPR26Q8NDV2 337 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 BRSK1Q8TDC3 778 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 BLOC1S5Q8TDH9 187 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 SLCO2A1Q92959 643 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 AP2M1Q96CW1 435 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 AGAP2Q99490 1192 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 ELF4Q99607 663 aaPredicted RBP10.02□□□□□ -0.81
ATG4A-206ENST00000457035 EDEM2Q9BV94 578 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 RIOK2Q9BVS4 552 aaKnown RBP10.02□□□□□ -0.81
ATG4A-206ENST00000457035 GTPBP2Q9BX10 602 aaKnown RBP10.02□□□□□ -0.81
ATG4A-206ENST00000457035 LGR4Q9BXB1 951 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 TEX101Q9BY14 249 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 GPR63Q9BZJ6 419 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 DDX47Q9H0S4 455 aaKnown RBP10.02□□□□□ -0.81
ATG4A-206ENST00000457035 FAM83DQ9H4H8 585 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 CAAP1Q9H8G2 361 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 TMEM9BQ9NQ34 198 aa10.02□□□□□ -0.81
ATG4A-206ENST00000457035 GDF3Q9NR23 364 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms