RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 PRSS51A0A1B0GVH4 220 aa18.34■□□□□ 0.53
SEMA3B-209ENST00000456560 TXNDC9O14530 226 aa18.34■□□□□ 0.53
SEMA3B-209ENST00000456560 GJB5O95377 273 aa18.34■□□□□ 0.53
SEMA3B-209ENST00000456560 CRTAMO95727 393 aa18.34■□□□□ 0.53
SEMA3B-209ENST00000456560 CAPNS1P04632 268 aa18.34■□□□□ 0.53
SEMA3B-209ENST00000456560 SNRPB2P08579 225 aaKnown RBP18.34■□□□□ 0.53
SEMA3B-209ENST00000456560 CDH13P55290 713 aa18.34■□□□□ 0.53
SEMA3B-209ENST00000456560 RPS24P62847 133 aaKnown RBP18.34■□□□□ 0.53
SEMA3B-209ENST00000456560 SH3BP2P78314 561 aa18.34■□□□□ 0.53
SEMA3B-209ENST00000456560 EML3Q32P44 896 aa18.34■□□□□ 0.53
SEMA3B-209ENST00000456560 GRAMD1BQ3KR37 738 aa18.34■□□□□ 0.53
SEMA3B-209ENST00000456560 MMEL1Q495T6 779 aa18.34■□□□□ 0.53
SEMA3B-209ENST00000456560 ARHGAP22Q7Z5H3 698 aa18.34■□□□□ 0.53
SEMA3B-209ENST00000456560 RYBPQ8N488 228 aaPredicted RBP18.34■□□□□ 0.53
SEMA3B-209ENST00000456560 C3orf30Q96M34 536 aa18.34■□□□□ 0.53
SEMA3B-209ENST00000456560 SPON2Q9BUD6 331 aa18.34■□□□□ 0.53
SEMA3B-209ENST00000456560 UNC93B1Q9H1C4 597 aa18.34■□□□□ 0.53
SEMA3B-209ENST00000456560 LRFN2Q9ULH4 789 aa18.34■□□□□ 0.53
SEMA3B-209ENST00000456560 MED16Q9Y2X0 877 aa18.34■□□□□ 0.53
SEMA3B-209ENST00000456560 ANKRD36A6QL64 1941 aa18.34■□□□□ 0.53
SEMA3B-209ENST00000456560 E7ENX8 843 aa18.33■□□□□ 0.53
SEMA3B-209ENST00000456560 CDK14O94921 469 aa18.33■□□□□ 0.53
SEMA3B-209ENST00000456560 PRLP01236 227 aa18.33■□□□□ 0.53
SEMA3B-209ENST00000456560 HDCP19113 662 aa18.33■□□□□ 0.53
SEMA3B-209ENST00000456560 SLC11A2P49281 568 aa18.33■□□□□ 0.53
SEMA3B-209ENST00000456560 OXCT1P55809 520 aa18.33■□□□□ 0.53
SEMA3B-209ENST00000456560 PDAP1Q13442 181 aaKnown RBP18.33■□□□□ 0.53
SEMA3B-209ENST00000456560 TICAM1Q8IUC6 712 aa18.33■□□□□ 0.53
SEMA3B-209ENST00000456560 NPAS4Q8IUM7 802 aa18.33■□□□□ 0.53
SEMA3B-209ENST00000456560 LILRA2Q8N149 483 aa18.33■□□□□ 0.53
SEMA3B-209ENST00000456560 LPGAT1Q92604 370 aa18.33■□□□□ 0.53
SEMA3B-209ENST00000456560 C19orf60Q96EN9 201 aa18.33■□□□□ 0.53
SEMA3B-209ENST00000456560 CEP295NLQ96MC4 621 aa18.33■□□□□ 0.53
SEMA3B-209ENST00000456560 PRICKLE1Q96MT3 831 aaPredicted RBP18.33■□□□□ 0.53
SEMA3B-209ENST00000456560 KLHL32Q96NJ5 620 aa18.33■□□□□ 0.53
SEMA3B-209ENST00000456560 CINPQ9BW66 212 aaPredicted RBP18.33■□□□□ 0.53
SEMA3B-209ENST00000456560 WBP1LQ9NX94 342 aa18.33■□□□□ 0.53
SEMA3B-209ENST00000456560 CCDC167Q9P0B6 97 aa18.33■□□□□ 0.53
SEMA3B-209ENST00000456560 UBXN8O00124 270 aa18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 TRIM24O15164 1050 aa18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 INSIG1O15503 277 aa18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 GNRH1P01148 92 aa18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 PABPC4LP0CB38 370 aaKnown RBP18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 PMLP29590 882 aa18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 GRIA2P42262 883 aa18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 ACADVLP49748 655 aa18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 GRM2Q14416 872 aa18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 PDK3Q15120 406 aa18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 C8orf82Q6P1X6 216 aaPredicted RBP18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 HACD2Q6Y1H2 254 aa18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 ICA1LQ8NDH6 482 aa18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 FBXO22Q8NEZ5 403 aa18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 MDGA1Q8NFP4 955 aa18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 PXYLP1Q8TE99 480 aa18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 NAT14Q8WUY8 206 aa18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 EXT2Q93063 718 aa18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 DTNBP1Q96EV8 351 aa18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 DCUN1D1Q96GG9 259 aa18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 SLC25A23Q9BV35 468 aa18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 MRPL40Q9NQ50 206 aaKnown RBP18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 ADA2Q9NZK5 511 aa18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 SUCOQ9UBS9 1254 aaKnown RBP18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 DNAJC15Q9Y5T4 150 aa18.33■□□□□ 0.52
SEMA3B-209ENST00000456560 ZNF840PA6NDX5 716 aa18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 CAPN8A6NHC0 703 aa18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 LRRC14BA6NHZ5 514 aa18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 PPP6CO00743 305 aa18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 CLDN11O75508 207 aa18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 SIX3O95343 332 aaPredicted RBP18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 KLKB1P03952 638 aa18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 TRIM25Q14258 630 aaKnown RBP18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 CYTH1Q15438 398 aa18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 TAF1AQ15573 450 aaPredicted RBP18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 KLHDC10Q6PID8 442 aa18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 PAOXQ6QHF9 649 aa18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 RAB44Q7Z6P3 723 aaPredicted RBP18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 DENND1CQ8IV53 801 aa18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 FAM156AQ8NDB6 213 aa18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 KIAA1191Q96A73 305 aa18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 ASB9Q96DX5 294 aa18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 LRGUKQ96M69 825 aa18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 AKTIPQ9H8T0 292 aa18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 SYTL2Q9HCH5 934 aa18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 FBRSL1Q9HCM7 1045 aaKnown RBP18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 PHF24Q9UPV7 400 aa18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 ARIH1Q9Y4X5 557 aaPredicted RBP18.32■□□□□ 0.52
SEMA3B-209ENST00000456560 ATP6AP2A0A1C7CYW4 349 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 ILVBLA1L0T0 632 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 ATP6AP2O75787 350 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 F11P03951 625 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 ALDOCP09972 364 aaKnown RBP18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 GPX3P22352 226 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 SCNN1BP51168 640 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 FOLH1Q04609 750 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 LSAMPQ13449 338 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 PFKFB4Q16877 469 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 SLC8B1Q6J4K2 584 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 FBXL19Q6PCT2 694 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 AFTPHQ6ULP2 937 aa18.31■□□□□ 0.52
SEMA3B-209ENST00000456560 FUNDC1Q8IVP5 155 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms