RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 CERCAMQ5T4B2 595 aa17.8■□□□□ 0.44
MSH6-207ENST00000456246 C11orf63Q6NUN7 778 aa17.8■□□□□ 0.44
MSH6-207ENST00000456246 MFSD7Q6UXD7 560 aa17.8■□□□□ 0.44
MSH6-207ENST00000456246 NT5DC3Q86UY8 548 aa17.8■□□□□ 0.44
MSH6-207ENST00000456246 SCARF2Q96GP6 870 aaPredicted RBP17.8■□□□□ 0.44
MSH6-207ENST00000456246 DCBLD2Q96PD2 775 aa17.8■□□□□ 0.44
MSH6-207ENST00000456246 SRPK1Q96SB4 655 aaKnown RBP17.8■□□□□ 0.44
MSH6-207ENST00000456246 CDH19Q9H159 772 aa17.8■□□□□ 0.44
MSH6-207ENST00000456246 SLC25A51Q9H1U9 297 aa17.8■□□□□ 0.44
MSH6-207ENST00000456246 DPEP2Q9H4A9 486 aa17.8■□□□□ 0.44
MSH6-207ENST00000456246 THSD1Q9NS62 852 aa17.8■□□□□ 0.44
MSH6-207ENST00000456246 PKD2L2Q9NZM6 624 aa17.8■□□□□ 0.44
MSH6-207ENST00000456246 SUFUQ9UMX1 484 aa17.8■□□□□ 0.44
MSH6-207ENST00000456246 PCDHGA8Q9Y5G5 932 aa17.8■□□□□ 0.44
MSH6-207ENST00000456246 PCDHA13Q9Y5I0 950 aa17.8■□□□□ 0.44
MSH6-207ENST00000456246 ENTPD2Q9Y5L3 495 aa17.8■□□□□ 0.44
MSH6-207ENST00000456246 ALG6Q9Y672 507 aa17.8■□□□□ 0.44
MSH6-207ENST00000456246 ITPR1Q14643 2758 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 C1orf232A0A0U1RR37 186 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 ZW10O43264 779 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 NOBOXO60393 691 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 SOD1P00441 154 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 MPOP05164 745 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 TNNT1P13805 278 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 ZNF75DP51815 510 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 PCBP4P57723 403 aaKnown RBP17.79■□□□□ 0.44
MSH6-207ENST00000456246 DYNLT1P63172 113 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 EIF3IQ13347 325 aaKnown RBP17.79■□□□□ 0.44
MSH6-207ENST00000456246 PTPRRQ15256 657 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 QPCTQ16769 361 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 C19orf48Q6RUI8 117 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 SPOCD1Q6ZMY3 1216 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 NYAP1Q6ZVC0 841 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 TMTC1Q8IUR5 882 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 KATNAL2Q8IYT4 538 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 EXD1Q8NHP7 514 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 LRRN4Q8WUT4 740 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 HNRNPLLQ8WVV9 542 aaKnown RBP17.79■□□□□ 0.44
MSH6-207ENST00000456246 IMP4Q96G21 291 aaKnown RBP17.79■□□□□ 0.44
MSH6-207ENST00000456246 RBM41Q96IZ5 413 aaKnown RBP17.79■□□□□ 0.44
MSH6-207ENST00000456246 HIC2Q96JB3 615 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 GFM1Q96RP9 751 aaKnown RBP17.79■□□□□ 0.44
MSH6-207ENST00000456246 SYNDIG1Q9H7V2 258 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 CD84Q9UIB8 345 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 HYOU1Q9Y4L1 999 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 COL27A1Q8IZC6 1860 aaPredicted RBP17.79■□□□□ 0.44
MSH6-207ENST00000456246 CACNA1GO43497 2377 aa17.79■□□□□ 0.44
MSH6-207ENST00000456246 ARHGEF17Q96PE2 2063 aaPredicted RBP17.78■□□□□ 0.44
MSH6-207ENST00000456246 B4DGG1 531 aa17.78■□□□□ 0.44
MSH6-207ENST00000456246 D6RAR5 112 aa17.78■□□□□ 0.44
MSH6-207ENST00000456246 CST8O60676 142 aa17.78■□□□□ 0.44
MSH6-207ENST00000456246 ZRANB2O95218 330 aaKnown RBP eCLIP17.78■□□□□ 0.44
MSH6-207ENST00000456246 CLDN7O95471 211 aa17.78■□□□□ 0.44
MSH6-207ENST00000456246 FECHP22830 423 aa17.78■□□□□ 0.44
MSH6-207ENST00000456246 RBMS1P29558 406 aaKnown RBP17.78■□□□□ 0.44
MSH6-207ENST00000456246 GNPDA1P46926 289 aa17.78■□□□□ 0.44
MSH6-207ENST00000456246 LRP8Q14114 963 aa17.78■□□□□ 0.44
MSH6-207ENST00000456246 HLTFQ14527 1009 aaKnown RBP eCLIP17.78■□□□□ 0.441e-7■□□□□ 9.6
MSH6-207ENST00000456246 PRKD1Q15139 912 aaPredicted RBP17.78■□□□□ 0.44
MSH6-207ENST00000456246 TEX44Q53QW1 395 aa17.78■□□□□ 0.44
MSH6-207ENST00000456246 NPNTQ6UXI9 565 aa17.78■□□□□ 0.44
MSH6-207ENST00000456246 CCNJLQ8IV13 435 aa17.78■□□□□ 0.44
MSH6-207ENST00000456246 RCOR2Q8IZ40 523 aa17.78■□□□□ 0.44
MSH6-207ENST00000456246 ZNF248Q8NDW4 579 aa17.78■□□□□ 0.44
MSH6-207ENST00000456246 WDR36Q8NI36 951 aaKnown RBP17.78■□□□□ 0.44
MSH6-207ENST00000456246 TFB1MQ8WVM0 346 aaKnown RBP17.78■□□□□ 0.44
MSH6-207ENST00000456246 P3H4Q92791 437 aa17.78■□□□□ 0.44
MSH6-207ENST00000456246 SCAMP4Q969E2 229 aa17.78■□□□□ 0.44
MSH6-207ENST00000456246 ATXN7L3BQ96GX2 97 aa17.78■□□□□ 0.44
MSH6-207ENST00000456246 LIN37Q96GY3 246 aaPredicted RBP17.78■□□□□ 0.44
MSH6-207ENST00000456246 TMEM74Q96NL1 305 aa17.78■□□□□ 0.44
MSH6-207ENST00000456246 AGAP3Q96P47 875 aa17.78■□□□□ 0.44
MSH6-207ENST00000456246 OR2M4Q96R27 311 aa17.78■□□□□ 0.44
MSH6-207ENST00000456246 RIOK2Q9BVS4 552 aaKnown RBP17.78■□□□□ 0.44
MSH6-207ENST00000456246 STRADBQ9C0K7 418 aa17.78■□□□□ 0.44
MSH6-207ENST00000456246 RAD18Q9NS91 495 aa17.78■□□□□ 0.44
MSH6-207ENST00000456246 SEPT10Q9P0V9 454 aa17.78■□□□□ 0.44
MSH6-207ENST00000456246 VPS18Q9P253 973 aa17.78■□□□□ 0.44
MSH6-207ENST00000456246 LAMA5O15230 3695 aa17.77■□□□□ 0.44
MSH6-207ENST00000456246 CCDC187A0A096LP49 1063 aa17.77■□□□□ 0.44
MSH6-207ENST00000456246 NDUFA10O95299 355 aa17.77■□□□□ 0.44
MSH6-207ENST00000456246 RPLP0P05388 317 aaKnown RBP17.77■□□□□ 0.44
MSH6-207ENST00000456246 SPINT3P49223 89 aa17.77■□□□□ 0.44
MSH6-207ENST00000456246 PPP2R5EQ16537 467 aa17.77■□□□□ 0.44
MSH6-207ENST00000456246 C3orf38Q5JPI3 329 aa17.77■□□□□ 0.44
MSH6-207ENST00000456246 CCDC70Q6NSX1 233 aa17.77■□□□□ 0.44
MSH6-207ENST00000456246 DAAM2Q86T65 1068 aa17.77■□□□□ 0.44
MSH6-207ENST00000456246 PDZD3Q86UT5 571 aa17.77■□□□□ 0.44
MSH6-207ENST00000456246 C17orf82Q86X59 251 aaPredicted RBP17.77■□□□□ 0.44
MSH6-207ENST00000456246 CCL4L1Q8NHW4 92 aa17.77■□□□□ 0.44
MSH6-207ENST00000456246 ZDHHC1Q8WTX9 485 aa17.77■□□□□ 0.44
MSH6-207ENST00000456246 TADA1Q96BN2 335 aa17.77■□□□□ 0.44
MSH6-207ENST00000456246 COX14Q96I36 57 aa17.77■□□□□ 0.44
MSH6-207ENST00000456246 SMIM14Q96QK8 99 aa17.77■□□□□ 0.44
MSH6-207ENST00000456246 TRIB3Q96RU7 358 aa17.77■□□□□ 0.44
MSH6-207ENST00000456246 VAT1Q99536 393 aa17.77■□□□□ 0.44
MSH6-207ENST00000456246 LRRN3Q9H3W5 708 aa17.77■□□□□ 0.44
MSH6-207ENST00000456246 FAM83DQ9H4H8 585 aa17.77■□□□□ 0.44
MSH6-207ENST00000456246 MAGEE1Q9HCI5 957 aa17.77■□□□□ 0.44
MSH6-207ENST00000456246 TAAR2Q9P1P5 351 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms