RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 PPP1R3AQ16821 1122 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 AFTPHQ6ULP2 937 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 LYSMD3Q7Z3D4 306 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 HPS6Q86YV9 775 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 CMTR2Q8IYT2 770 aaKnown RBP11.75□□□□□ -0.53
VTA1-203ENST00000452973 CCDC126Q96EE4 140 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 C11orf49Q9H6J7 331 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 TAS2R13Q9NYV9 303 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 VTI1BQ9UEU0 232 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 CHD5Q8TDI0 1954 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 SUPT3HB4E1H0 165 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 UBFD1O14562 309 aaKnown RBP11.75□□□□□ -0.53
VTA1-203ENST00000452973 GREM1O60565 184 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 TBX10O75333 385 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 SUPT3HO75486 399 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 MSX2P35548 267 aaPredicted RBP11.75□□□□□ -0.53
VTA1-203ENST00000452973 BTKQ06187 659 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 METTL21CQ5VZV1 264 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 NCEH1Q6PIU2 408 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 RNF148Q8N7C7 305 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 GPR150Q8NGU9 434 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 ESAMQ96AP7 390 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 NSUN5Q96P11 429 aaKnown RBP11.75□□□□□ -0.53
VTA1-203ENST00000452973 SLC30A3Q99726 388 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 EML4Q9HC35 981 aaKnown RBP11.75□□□□□ -0.53
VTA1-203ENST00000452973 UTP6Q9NYH9 597 aaKnown RBP11.75□□□□□ -0.53
VTA1-203ENST00000452973 ARHGAP26Q9UNA1 814 aa11.75□□□□□ -0.53
VTA1-203ENST00000452973 COL4A6Q14031 1691 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 RANBP2P49792 3224 aaKnown RBP11.74□□□□□ -0.53
VTA1-203ENST00000452973 ANKRD36A6QL64 1941 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 ITGAXP20702 1163 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 OGNP20774 298 aaKnown RBP11.74□□□□□ -0.53
VTA1-203ENST00000452973 RAP1GDS1P52306 607 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 ATXN3P54252 364 aaPredicted RBP11.74□□□□□ -0.53
VTA1-203ENST00000452973 DNAJB13P59910 316 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 TBL3Q12788 808 aaKnown RBP11.74□□□□□ -0.53
VTA1-203ENST00000452973 TAF11Q15544 211 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 SLC14A2Q15849 920 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 CMTM8Q8IZV2 173 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 SIDT2Q8NBJ9 832 aaKnown RBP11.74□□□□□ -0.53
VTA1-203ENST00000452973 MICAL1Q8TDZ2 1067 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 LPGAT1Q92604 370 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 C1orf21Q9H246 121 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 RNF112Q9ULX5 631 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 CCDC189A1A4V9 331 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 E5RI56 91 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 SLCO1B7G3V0H7 640 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 CDC7O00311 574 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 ENO3P13929 434 aaPredicted RBP11.74□□□□□ -0.53
VTA1-203ENST00000452973 ITGB6P18564 788 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 GNAZP19086 355 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 CD70P32970 193 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 PPM1AP35813 382 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 PPARGP37231 505 aaPredicted RBP11.74□□□□□ -0.53
VTA1-203ENST00000452973 STK19P49842 368 aaPredicted RBP11.74□□□□□ -0.53
VTA1-203ENST00000452973 TSNQ15631 228 aaKnown RBP11.74□□□□□ -0.53
VTA1-203ENST00000452973 PLPP4Q5VZY2 271 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 FAM151BQ6UXP7 276 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 SLC22A9Q8IVM8 553 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 KIRREL3Q8IZU9 778 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 TMEM199Q8N511 208 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 FIBCD1Q8N539 461 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 KREMEN2Q8NCW0 462 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 PEX13Q92968 403 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 ZNF333Q96JL9 665 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 C2orf49Q9BVC5 232 aaPredicted RBP11.74□□□□□ -0.53
VTA1-203ENST00000452973 GSTO2Q9H4Y5 243 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 IKZF3Q9UKT9 509 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 CCL26Q9Y258 94 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 PKP3Q9Y446 797 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 TRAF6Q9Y4K3 522 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 PTGDR2Q9Y5Y4 395 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 COPG1Q9Y678 874 aaKnown RBP11.74□□□□□ -0.53
VTA1-203ENST00000452973 MYOFQ9NZM1 2061 aa11.74□□□□□ -0.53
VTA1-203ENST00000452973 BTN3A1O00481 513 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 SDHDO14521 159 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 RFPL2O75678 378 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 LMNAP02545 664 aaKnown RBP11.73□□□□□ -0.53
VTA1-203ENST00000452973 IMPDH1P20839 514 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 RFC2P35250 354 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 CYLC2Q14093 348 aaPredicted RBP11.73□□□□□ -0.53
VTA1-203ENST00000452973 ZNF678Q5SXM1 525 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 ARMC12Q5T9G4 340 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 GALNT7Q86SF2 657 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 ENDOVQ8N8Q3 282 aaKnown RBP11.73□□□□□ -0.53
VTA1-203ENST00000452973 CEP70Q8NHQ1 597 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 RCN3Q96D15 328 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 CCDC97Q96F63 343 aaPredicted RBP11.73□□□□□ -0.53
VTA1-203ENST00000452973 TCF25Q9BQ70 676 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 MID1IP1Q9NPA3 183 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 OR51B4Q9Y5P0 310 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 NPEPPSL1A6NEC2 478 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 TRPC5OSA6NMA1 111 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 HIDE1A8MVS5 230 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 F8W8V4 182 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 GPC4O75487 556 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 THRAP10827 490 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 CTSOP43234 321 aaPredicted RBP11.73□□□□□ -0.53
VTA1-203ENST00000452973 LMAN2Q12907 356 aa11.73□□□□□ -0.53
VTA1-203ENST00000452973 TYSND1Q2T9J0 566 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms