RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 ZNF765Q7L2R6 523 aa19.9■□□□□ 0.78
COL9A3-202ENST00000452372 KANSL1Q7Z3B3 1105 aa19.9■□□□□ 0.78
COL9A3-202ENST00000452372 GATAD2AQ86YP4 633 aa19.9■□□□□ 0.78
COL9A3-202ENST00000452372 PELI3Q8N2H9 469 aa19.9■□□□□ 0.78
COL9A3-202ENST00000452372 RASGEF1CQ8N431 466 aa19.9■□□□□ 0.78
COL9A3-202ENST00000452372 ABCG8Q9H221 673 aa19.9■□□□□ 0.78
COL9A3-202ENST00000452372 ZFYVE1Q9HBF4 777 aa19.9■□□□□ 0.78
COL9A3-202ENST00000452372 DNAJC28Q9NX36 388 aa19.9■□□□□ 0.78
COL9A3-202ENST00000452372 ZNF148Q9UQR1 794 aa19.9■□□□□ 0.78
COL9A3-202ENST00000452372 OR1A2Q9Y585 309 aa19.9■□□□□ 0.78
COL9A3-202ENST00000452372 RGSL1A5PLK6 1076 aa19.89■□□□□ 0.77
COL9A3-202ENST00000452372 K7ESM1 405 aa19.89■□□□□ 0.77
COL9A3-202ENST00000452372 ATP1A1P05023 1023 aaKnown RBP19.89■□□□□ 0.77
COL9A3-202ENST00000452372 PIRTP0C851 137 aa19.89■□□□□ 0.77
COL9A3-202ENST00000452372 NME1P15531 152 aaKnown RBP19.89■□□□□ 0.77
COL9A3-202ENST00000452372 TSHRP16473 764 aa19.89■□□□□ 0.77
COL9A3-202ENST00000452372 HTR1BP28222 390 aa19.89■□□□□ 0.77
COL9A3-202ENST00000452372 TEAD1P28347 426 aa19.89■□□□□ 0.77
COL9A3-202ENST00000452372 GRK6P43250 576 aa19.89■□□□□ 0.77
COL9A3-202ENST00000452372 EIF2B5Q13144 721 aaKnown RBP19.89■□□□□ 0.77
COL9A3-202ENST00000452372 SNX1Q13596 522 aa19.89■□□□□ 0.77
COL9A3-202ENST00000452372 NFATC4Q14934 902 aa19.89■□□□□ 0.77
COL9A3-202ENST00000452372 LONRF2Q1L5Z9 754 aa19.89■□□□□ 0.77
COL9A3-202ENST00000452372 P3H1Q32P28 736 aa19.89■□□□□ 0.77
COL9A3-202ENST00000452372 ZNF542PQ5EBM4 170 aa19.89■□□□□ 0.77
COL9A3-202ENST00000452372 TMPRSS7Q7RTY8 843 aa19.89■□□□□ 0.77
COL9A3-202ENST00000452372 LYSMD3Q7Z3D4 306 aa19.89■□□□□ 0.77
COL9A3-202ENST00000452372 MARCH9Q86YJ5 346 aa19.89■□□□□ 0.77
COL9A3-202ENST00000452372 KLHDC8BQ8IXV7 354 aa19.89■□□□□ 0.77
COL9A3-202ENST00000452372 SLC25A41Q8N5S1 370 aa19.89■□□□□ 0.77
COL9A3-202ENST00000452372 FUBP1Q96AE4 644 aaKnown RBP19.89■□□□□ 0.77
COL9A3-202ENST00000452372 AP2M1Q96CW1 435 aa19.89■□□□□ 0.77
COL9A3-202ENST00000452372 EID2BQ96D98 161 aa19.89■□□□□ 0.77
COL9A3-202ENST00000452372 FSD1LQ9BXM9 530 aa19.89■□□□□ 0.77
COL9A3-202ENST00000452372 CD84Q9UIB8 345 aa19.89■□□□□ 0.77
COL9A3-202ENST00000452372 SHOC2Q9UQ13 582 aa19.89■□□□□ 0.77
COL9A3-202ENST00000452372 DRG1Q9Y295 367 aaKnown RBP19.89■□□□□ 0.77
COL9A3-202ENST00000452372 URB1O60287 2271 aaKnown RBP19.88■□□□□ 0.77
COL9A3-202ENST00000452372 CACNB4O00305 520 aaPredicted RBP19.88■□□□□ 0.77
COL9A3-202ENST00000452372 METTL18O95568 372 aa19.88■□□□□ 0.77
COL9A3-202ENST00000452372 AGTP01019 485 aa19.88■□□□□ 0.77
COL9A3-202ENST00000452372 FGF1P05230 155 aa19.88■□□□□ 0.77
COL9A3-202ENST00000452372 DGKAP23743 735 aa19.88■□□□□ 0.77
COL9A3-202ENST00000452372 ADRA1AP35348 466 aa19.88■□□□□ 0.77
COL9A3-202ENST00000452372 CHRNA4P43681 627 aa19.88■□□□□ 0.77
COL9A3-202ENST00000452372 SPINT3P49223 89 aa19.88■□□□□ 0.77
COL9A3-202ENST00000452372 KIAA1024LP59773 190 aa19.88■□□□□ 0.77
COL9A3-202ENST00000452372 HNRNPKP61978 463 aaKnown RBP eCLIP19.88■□□□□ 0.77
COL9A3-202ENST00000452372 RANBP10Q6VN20 620 aa19.88■□□□□ 0.77
COL9A3-202ENST00000452372 TMC3Q7Z5M5 1100 aa19.88■□□□□ 0.77
COL9A3-202ENST00000452372 SLC25A45Q8N413 288 aa19.88■□□□□ 0.77
COL9A3-202ENST00000452372 ATL2Q8NHH9 583 aa19.88■□□□□ 0.77
COL9A3-202ENST00000452372 SCAMP4Q969E2 229 aa19.88■□□□□ 0.77
COL9A3-202ENST00000452372 TEX101Q9BY14 249 aa19.88■□□□□ 0.77
COL9A3-202ENST00000452372 GPR63Q9BZJ6 419 aa19.88■□□□□ 0.77
COL9A3-202ENST00000452372 TRABDQ9H4I3 376 aa19.88■□□□□ 0.77
COL9A3-202ENST00000452372 WDR26Q9H7D7 661 aa19.88■□□□□ 0.77
COL9A3-202ENST00000452372 HOMER3Q9NSC5 361 aa19.88■□□□□ 0.77
COL9A3-202ENST00000452372 PKD2L2Q9NZM6 624 aa19.88■□□□□ 0.77
COL9A3-202ENST00000452372 KLF15Q9UIH9 416 aa19.88■□□□□ 0.77
COL9A3-202ENST00000452372 TTC7AQ9ULT0 858 aaPredicted RBP19.88■□□□□ 0.77
COL9A3-202ENST00000452372 ZNF711Q9Y462 761 aa19.88■□□□□ 0.77
COL9A3-202ENST00000452372 SPO11Q9Y5K1 396 aa19.88■□□□□ 0.77
COL9A3-202ENST00000452372 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.88■□□□□ 0.77
COL9A3-202ENST00000452372 GOLGA6CA6NDK9 693 aa19.87■□□□□ 0.77
COL9A3-202ENST00000452372 GOLGA6BA6NDN3 693 aa19.87■□□□□ 0.77
COL9A3-202ENST00000452372 TNFSF14O43557 240 aa19.87■□□□□ 0.77
COL9A3-202ENST00000452372 SDC3O75056 442 aa19.87■□□□□ 0.77
COL9A3-202ENST00000452372 PIAS2O75928 621 aa19.87■□□□□ 0.77
COL9A3-202ENST00000452372 PYGLP06737 847 aa19.87■□□□□ 0.77
COL9A3-202ENST00000452372 GOLGA6DP0CG33 693 aa19.87■□□□□ 0.77
COL9A3-202ENST00000452372 JUNDP17535 347 aa19.87■□□□□ 0.77
COL9A3-202ENST00000452372 INAVAQ3KP66 663 aa19.87■□□□□ 0.77
COL9A3-202ENST00000452372 RAET1GQ6H3X3 334 aa19.87■□□□□ 0.77
COL9A3-202ENST00000452372 ENPP7Q6UWV6 458 aa19.87■□□□□ 0.77
COL9A3-202ENST00000452372 PROSER1Q86XN7 944 aa19.87■□□□□ 0.77
COL9A3-202ENST00000452372 BTN2A2Q8WVV5 523 aa19.87■□□□□ 0.77
COL9A3-202ENST00000452372 WDR92Q96MX6 357 aa19.87■□□□□ 0.77
COL9A3-202ENST00000452372 OSBPL9Q96SU4 736 aa19.87■□□□□ 0.77
COL9A3-202ENST00000452372 FICDQ9BVA6 458 aa19.87■□□□□ 0.77
COL9A3-202ENST00000452372 FAM83DQ9H4H8 585 aa19.87■□□□□ 0.77
COL9A3-202ENST00000452372 CAAP1Q9H8G2 361 aa19.87■□□□□ 0.77
COL9A3-202ENST00000452372 GOLGA6AQ9NYA3 693 aa19.87■□□□□ 0.77
COL9A3-202ENST00000452372 HACD3Q9P035 362 aa19.87■□□□□ 0.77
COL9A3-202ENST00000452372 PNMA8BQ9ULN7 279 aaPredicted RBP19.87■□□□□ 0.77
COL9A3-202ENST00000452372 H3BM21 787 aa19.86■□□□□ 0.77
COL9A3-202ENST00000452372 PDE2AO00408 941 aaPredicted RBP19.86■□□□□ 0.77
COL9A3-202ENST00000452372 KELP23276 732 aa19.86■□□□□ 0.77
COL9A3-202ENST00000452372 GPR1P46091 355 aa19.86■□□□□ 0.77
COL9A3-202ENST00000452372 BLKP51451 505 aa19.86■□□□□ 0.77
COL9A3-202ENST00000452372 PPARDQ03181 441 aa19.86■□□□□ 0.77
COL9A3-202ENST00000452372 KCTD11Q693B1 232 aa19.86■□□□□ 0.77
COL9A3-202ENST00000452372 HEATR4Q86WZ0 1026 aa19.86■□□□□ 0.77
COL9A3-202ENST00000452372 LRRC45Q96CN5 670 aa19.86■□□□□ 0.77
COL9A3-202ENST00000452372 MS4A14Q96JA4 679 aa19.86■□□□□ 0.77
COL9A3-202ENST00000452372 WDR24Q96S15 920 aa19.86■□□□□ 0.77
COL9A3-202ENST00000452372 RIOK2Q9BVS4 552 aaKnown RBP19.86■□□□□ 0.77
COL9A3-202ENST00000452372 LGR4Q9BXB1 951 aa19.86■□□□□ 0.77
COL9A3-202ENST00000452372 PHPT1Q9NRX4 125 aaPredicted RBP19.86■□□□□ 0.77
COL9A3-202ENST00000452372 RAD18Q9NS91 495 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms