RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 RUNDC3BQ96NL0 473 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 NT5C1BQ96P26 610 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 TGS1Q96RS0 853 aaKnown RBP3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 NELL2Q99435 816 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 FMO2Q99518 471 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 CINPQ9BW66 212 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 AMNQ9BXJ7 453 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 TWSG1Q9GZX9 223 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 PAIP1Q9H074 479 aaKnown RBP3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZMYND12Q9H0C1 365 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 NT5C3AQ9H0P0 336 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 VPS11Q9H270 941 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 NCOR1P1Q9H4R4 102 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 DHX33Q9H6R0 707 aaKnown RBP3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 AZI2Q9H6S1 392 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 EPS8L2Q9H6S3 715 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 GREM2Q9H772 168 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 ERVMER34-1Q9H9K5 563 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 GPN2Q9H9Y4 310 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 SACM1LQ9NTJ5 587 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 ACOXLQ9NUZ1 547 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 SMARCAL1Q9NZC9 954 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 AMACRQ9UHK6 382 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 EVLQ9UI08 416 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 ADAMTS6Q9UKP5 1117 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 USP18Q9UMW8 372 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 NENFQ9UMX5 172 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 RBMX2Q9Y388 322 aaKnown RBP3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 UGT2A1Q9Y4X1 527 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 PCDHB1Q9Y5F3 818 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 PCDHA13Q9Y5I0 950 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 SNX8Q9Y5X2 465 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 C3P01024 1663 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 USP54Q70EL1 1684 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 CCDC88AQ3V6T2 1871 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 CLUHO75153 1309 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 DICER1Q9UPY3 1922 aaKnown RBP3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 PALLDQ8WX93 1383 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZMYM2Q9UBW7 1377 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 DOCK2Q92608 1830 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 PIK3C2BO00750 1634 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 LRP6O75581 1613 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 CRB1P82279 1406 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 LMTK3Q96Q04 1460 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 HEATR9A2RTY3 570 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 FITM1A5D6W6 292 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 LRRIQ4A6NIV6 560 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 SLC9B1P1A6NJY1 282 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 A6NL46 340 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 SMIM23A6NLE4 172 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 LRRC53A6NM62 1247 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZNF839A8K0R7 811 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 FAM25AB3EWG3 89 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 FAM25CB3EWG5 89 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 FAM25GB3EWG6 89 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 PSMD11O00231 422 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 PSMD12O00232 456 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 TXNDC9O14530 226 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 CTDSP2O14595 271 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 RASGRF2O14827 1237 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 KIAA0391O15091 583 aaKnown RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 RIPK2O43353 540 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 TLR5O60602 858 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 TSC22D2O75157 780 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 TAF5LO75529 589 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 RHOBTB1O94844 696 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 CAMTA2O94983 1202 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 EPN2O95208 641 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZBTB7AO95365 584 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 MOCS3O95396 460 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 PAPLNO95428 1278 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 H6PDO95479 791 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 CPNE6O95741 557 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 CHRNA1P02708 482 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 LRG1P02750 347 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 FTLP02792 175 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 IFNA16P05015 189 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 JUNP05412 331 aaKnown RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 C8AP07357 584 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 DBHP09172 617 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 FAM58BPP0C7Q3 252 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 JUNBP17275 347 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 ABCB4P21439 1286 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 RPA1P27694 616 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 GUCY1A2P33402 732 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 RFC4P35249 363 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 PPM1AP35813 382 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 HMGCLP35914 325 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 CPOXP36551 454 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 HPCAL1P37235 193 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 SPAM1P38567 509 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 DDOSTP39656 456 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 CD96P40200 585 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 CASP3P42574 277 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 CASP2P42575 452 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 NAMPTP43490 491 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 ABCG1P45844 678 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 CLCN4P51793 760 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 HK2P52789 917 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 NKX2-5P52952 324 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms