RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 FEZ2Q9UHY8 353 aaPredicted RBP13.98□□□□□ -0.17
GTF3C3-206ENST00000448539 SPO11Q9Y5K1 396 aa13.98□□□□□ -0.17
GTF3C3-206ENST00000448539 C2orf81A6NN90 581 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 K7ESM1 405 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 SH3BP5O60239 455 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 SDC3O75056 442 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 USP12O75317 370 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 RASGRP1O95267 797 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 AP2A1O95782 977 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 GAS8O95995 478 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 CSF2P04141 144 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 HOXC4P09017 264 aaPredicted RBP13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 ZSCAN5DPP0CG00 497 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 ETS1P14921 441 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 TEAD1P28347 426 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 CASQ1P31415 396 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 BLKP51451 505 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 BNIP3Q12983 259 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 SHBQ15464 509 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 TPRG1LQ5T0D9 272 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 ZDHHC20Q5W0Z9 365 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 ALS2CLQ60I27 953 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 LINC00523Q86TU6 105 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 GATAD2AQ86YP4 633 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 PHACTR4Q8IZ21 702 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 DEFB124Q8NES8 71 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 OR56A4Q8NGH8 313 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 RHBDD1Q8TEB9 315 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 SAP25Q8TEE9 199 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 CAPZA3Q96KX2 299 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 SPATA16Q9BXB7 569 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 SLC13A1Q9BZW2 595 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 RAB6BQ9NRW1 208 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 SMARCAL1Q9NZC9 954 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 MOSPD1Q9UJG1 213 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 PKP3Q9Y446 797 aa13.97□□□□□ -0.17
GTF3C3-206ENST00000448539 NEMP2A6NFY4 417 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 TM4SF5O14894 197 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 AURKAO14965 403 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 CRTAMO95727 393 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 TNFP01375 233 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 MYCLP1P12525 358 aaPredicted RBP13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 NME1P15531 152 aaKnown RBP13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 CSRP1P21291 193 aaKnown RBP13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 RPL22P35268 128 aaKnown RBP13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 HMGCLP35914 325 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 PAFAH1B1P43034 410 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 GRK6P43250 576 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 NOVA1P51513 510 aaKnown RBP13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 DCDC1P59894 354 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 SRP54P61011 504 aaKnown RBP13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 BASP1P80723 227 aaKnown RBP13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 CDK3Q00526 305 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 PDE1BQ01064 536 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 EIF2B5Q13144 721 aaKnown RBP13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 PPM1JQ5JR12 505 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 KCTD11Q693B1 232 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 ADAMTSL4Q6UY14 1074 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 PPP1R21Q6ZMI0 780 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 RD3Q7Z3Z2 195 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 PRUNE1Q86TP1 453 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 HID1Q8IV36 788 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 KLHDC8BQ8IXV7 354 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 PELI3Q8N2H9 469 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 DNAAF3Q8N9W5 541 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 GRK7Q8WTQ7 553 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 EID2BQ96D98 161 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 TEX101Q9BY14 249 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 BPIFA1Q9NP55 256 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 SPASTQ9UBP0 616 aa13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 APOBEC3BQ9UH17 382 aaKnown RBP13.96□□□□□ -0.17
GTF3C3-206ENST00000448539 TNFRSF10CO14798 259 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 INPP4BO15327 924 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 STX7O15400 261 aaKnown RBP13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 PHF2O75151 1096 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 PPFIA2O75334 1257 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 PIAS2O75928 621 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 KRT14P02533 472 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 APRTP07741 180 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 ALPPL2P10696 532 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 CTSEP14091 401 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 BPIP17213 487 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 DGKAP23743 735 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 COILP38432 576 aaPredicted RBP13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 FNTAP49354 379 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 ETF1P62495 437 aaKnown RBP13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 OLIG2Q13516 323 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 SEMA5AQ13591 1074 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 TAF1AQ15573 450 aaPredicted RBP13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 CYP1B1Q16678 543 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 HENMT1Q5T8I9 393 aaKnown RBP13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 CCDC137Q6PK04 289 aaKnown RBP13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 DBX2Q6ZNG2 339 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 PIP4P1Q86T03 277 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 TTC30BQ8N4P2 665 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 GLIS1Q8NBF1 620 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 GPR26Q8NDV2 337 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 BRSK1Q8TDC3 778 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 LMX1AQ8TE12 382 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 TSACCQ96A04 125 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms