RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 SLC32A1Q9H598 525 aa13.32□□□□□ -0.28
SNHG4-201ENST00000448190 RAB6BQ9NRW1 208 aa13.32□□□□□ -0.28
SNHG4-201ENST00000448190 PKD2L2Q9NZM6 624 aa13.32□□□□□ -0.28
SNHG4-201ENST00000448190 PCDHGB2Q9Y5G2 931 aa13.32□□□□□ -0.28
SNHG4-201ENST00000448190 ARL5AQ9Y689 179 aa13.32□□□□□ -0.28
SNHG4-201ENST00000448190 SPTBN4Q9H254 2564 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 SHROOM3Q8TF72 1996 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 PGRMC1O00264 195 aaKnown RBP13.31□□□□□ -0.28
SNHG4-201ENST00000448190 TRIM38O00635 465 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 PIAS2O75928 621 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 SOD1P00441 154 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 FUCA1P04066 466 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 CSF2P04141 144 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 CELA2BP08218 269 aaPredicted RBP13.31□□□□□ -0.28
SNHG4-201ENST00000448190 BPIP17213 487 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 HTR1BP28222 390 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 ACTN2P35609 894 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 GRIA1P42261 906 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 LMAN1P49257 510 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 CDK3Q00526 305 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 PPARDQ03181 441 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 DPTQ07507 201 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 TRIP6Q15654 476 aaKnown RBP13.31□□□□□ -0.28
SNHG4-201ENST00000448190 P3H1Q32P28 736 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 PRRT3Q5FWE3 981 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 ZNF648Q5T619 568 aaPredicted RBP13.31□□□□□ -0.28
SNHG4-201ENST00000448190 KCTD11Q693B1 232 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 DRICH1Q6PGQ1 229 aaPredicted RBP13.31□□□□□ -0.28
SNHG4-201ENST00000448190 MACC1Q6ZN28 852 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 MICALCLQ6ZW33 695 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 MARK2Q7KZI7 788 aaKnown RBP13.31□□□□□ -0.28
SNHG4-201ENST00000448190 KANSL1Q7Z3B3 1105 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 PHACTR4Q8IZ21 702 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 TTC30BQ8N4P2 665 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 OXR1Q8N573 874 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 WDR92Q96MX6 357 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 NAPGQ99747 312 aaPredicted RBP13.31□□□□□ -0.28
SNHG4-201ENST00000448190 SPATA16Q9BXB7 569 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 TEX101Q9BY14 249 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 CYP4F12Q9HCS2 524 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 FGF22Q9HCT0 170 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 PHPT1Q9NRX4 125 aaPredicted RBP13.31□□□□□ -0.28
SNHG4-201ENST00000448190 KLQ9UEF7 1012 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 PCOLCE2Q9UKZ9 415 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 CNOT6Q9ULM6 557 aaKnown RBP13.31□□□□□ -0.28
SNHG4-201ENST00000448190 TTC7AQ9ULT0 858 aaPredicted RBP13.31□□□□□ -0.28
SNHG4-201ENST00000448190 ZKSCAN5Q9Y2L8 839 aa13.31□□□□□ -0.28
SNHG4-201ENST00000448190 TNRC6BQ9UPQ9 1833 aaKnown RBP13.3□□□□□ -0.28
SNHG4-201ENST00000448190 FADS2P1A8MWK0 482 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 E7EVH7 732 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 FANCGO15287 622 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 UGT1A9O60656 530 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 CBFA2T3O75081 653 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 ZNF189O75820 626 aaPredicted RBP13.3□□□□□ -0.28
SNHG4-201ENST00000448190 ASMTLO95671 621 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 TNFP01375 233 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 FGF1P05230 155 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 CEACAM5P06731 702 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 CTSEP14091 401 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 NME1P15531 152 aaKnown RBP13.3□□□□□ -0.28
SNHG4-201ENST00000448190 TSHRP16473 764 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 UGT1A6P19224 532 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 CSRP1P21291 193 aaKnown RBP13.3□□□□□ -0.28
SNHG4-201ENST00000448190 UGT1A1P22309 533 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 UGT1A4P22310 534 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 UGT1A3P35503 534 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 UGT1A5P35504 534 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 COILP38432 576 aaPredicted RBP13.3□□□□□ -0.28
SNHG4-201ENST00000448190 GRK6P43250 576 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 VPS41P49754 854 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 HNRNPKP61978 463 aaKnown RBP eCLIP13.3□□□□□ -0.28
SNHG4-201ENST00000448190 SIM1P81133 766 aaPredicted RBP13.3□□□□□ -0.28
SNHG4-201ENST00000448190 TMPRSS15P98073 1019 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 DEFB133Q30KQ1 61 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 N4BP2L1Q5TBK1 243 aaPredicted RBP13.3□□□□□ -0.28
SNHG4-201ENST00000448190 ZNF765Q7L2R6 523 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 GLT6D1Q7Z4J2 308 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 PNPLA1Q8N8W4 532 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 OR56A4Q8NGH8 313 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 ATL2Q8NHH9 583 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 ACTRT1Q8TDG2 376 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 PDXPQ96GD0 296 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 HIC2Q96JB3 615 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 SLC13A1Q9BZW2 595 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 CLPBQ9H078 707 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 UGT1A7Q9HAW7 530 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 UGT1A10Q9HAW8 530 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 UGT1A8Q9HAW9 530 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 HOMER3Q9NSC5 361 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 KCTD5Q9NXV2 234 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 APOBEC3BQ9UH17 382 aaKnown RBP13.3□□□□□ -0.28
SNHG4-201ENST00000448190 PLEKHM1Q9Y4G2 1056 aa13.3□□□□□ -0.28
SNHG4-201ENST00000448190 CEP192Q8TEP8 1941 aa13.29□□□□□ -0.28
SNHG4-201ENST00000448190 PCDH15Q96QU1 1955 aa13.29□□□□□ -0.28
SNHG4-201ENST00000448190 CCDC78A2IDD5 438 aa13.29□□□□□ -0.28
SNHG4-201ENST00000448190 CTAGE9A4FU28 777 aa13.29□□□□□ -0.28
SNHG4-201ENST00000448190 RGSL1A5PLK6 1076 aa13.29□□□□□ -0.28
SNHG4-201ENST00000448190 CCL22O00626 93 aa13.29□□□□□ -0.28
SNHG4-201ENST00000448190 TOR1BO14657 336 aa13.29□□□□□ -0.28
SNHG4-201ENST00000448190 STX7O15400 261 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms