RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 ETV3P41162 512 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 CCR2P41597 374 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 GABRB2P47870 512 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 LEPRP48357 1165 aaKnown RBP13.08□□□□□ -0.32
DDX56-206ENST00000446987 GCNT1Q02742 428 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 SMARCB1Q12824 385 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 NFE2Q16621 373 aaPredicted RBP13.08□□□□□ -0.32
DDX56-206ENST00000446987 C15orf59Q2T9L4 293 aaPredicted RBP13.08□□□□□ -0.32
DDX56-206ENST00000446987 WDR44Q5JSH3 913 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 FNBP1LQ5T0N5 605 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 ATAD3BQ5T9A4 648 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 SDHAF4Q5VUM1 108 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 MBLAC2Q68D91 279 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 TMEM26Q6ZUK4 368 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 ZNF677Q86XU0 584 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 CACTIN-AS1Q8N1I8 211 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 C12orf29Q8N999 325 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 FAM47BQ8NA70 645 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.08□□□□□ -0.32
DDX56-206ENST00000446987 CPT1BQ92523 772 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 FUBP3Q96I24 572 aaKnown RBP eCLIP13.08□□□□□ -0.32
DDX56-206ENST00000446987 ZNF778Q96MU6 729 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 BCL7BQ9BQE9 202 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 MECRQ9BV79 373 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 ADAM33Q9BZ11 813 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 RNF38Q9H0F5 515 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 RAD21L1Q9H4I0 556 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 ZNF334Q9HCZ1 680 aaPredicted RBP13.08□□□□□ -0.32
DDX56-206ENST00000446987 SCUBE2Q9NQ36 999 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 DUS2Q9NX74 493 aaKnown RBP13.08□□□□□ -0.32
DDX56-206ENST00000446987 TBC1D14Q9P2M4 693 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 MARCOQ9UEW3 520 aaPredicted RBP13.08□□□□□ -0.32
DDX56-206ENST00000446987 DPP7Q9UHL4 492 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 XPO7Q9UIA9 1087 aaKnown RBP13.08□□□□□ -0.32
DDX56-206ENST00000446987 MYO16Q9Y6X6 1858 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 TCRBV9S1A1TA0A576 114 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 ISPDA4D126 451 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 PSMD11O00231 422 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 RFPL1O75677 317 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 SEC14L2O76054 403 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 SERPINE1P05121 402 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 ZSCAN5DPP0CG00 497 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 BMP2P12643 396 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 PRKCAP17252 672 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 XRCC1P18887 633 aaPredicted RBP13.08□□□□□ -0.32
DDX56-206ENST00000446987 CNTFP26441 200 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 IFNA8P32881 189 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 NUDT1P36639 197 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 GRIK1P39086 918 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 HARS2P49590 506 aaKnown RBP13.08□□□□□ -0.32
DDX56-206ENST00000446987 ZNF132P52740 706 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 IST1P53990 364 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 CDH15P55291 814 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 P2RX3P56373 397 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 GNA12Q03113 381 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 PRKCQQ04759 706 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 TRAP1Q12931 704 aaKnown RBP13.08□□□□□ -0.32
DDX56-206ENST00000446987 CDONQ4KMG0 1287 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 TMTC4Q5T4D3 741 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 INTS11Q5TA45 600 aaKnown RBP13.08□□□□□ -0.32
DDX56-206ENST00000446987 GRASPQ7Z6J2 395 aaPredicted RBP13.08□□□□□ -0.32
DDX56-206ENST00000446987 FAM35AQ86V20 835 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 HS6ST3Q8IZP7 471 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 SLC35B2Q8TB61 432 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 GIPC2Q8TF65 315 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 CAPSLQ8WWF8 208 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 DDX1Q92499 740 aaKnown RBP13.08□□□□□ -0.32
DDX56-206ENST00000446987 TP53INP1Q96A56 240 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 NRBF2Q96F24 287 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 MAGED4Q96JG8 741 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 VCPIP1Q96JH7 1222 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 NECAB3Q96P71 396 aaPredicted RBP13.08□□□□□ -0.32
DDX56-206ENST00000446987 TCF12Q99081 682 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 SEPT5Q99719 369 aaPredicted RBP13.08□□□□□ -0.32
DDX56-206ENST00000446987 WDR6Q9NNW5 1121 aaKnown RBP13.08□□□□□ -0.32
DDX56-206ENST00000446987 FAM49BQ9NUQ9 324 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 CHORDC1Q9UHD1 332 aaPredicted RBP13.08□□□□□ -0.32
DDX56-206ENST00000446987 TESMINQ9Y4I5 508 aa13.08□□□□□ -0.32
DDX56-206ENST00000446987 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.07□□□□□ -0.32
DDX56-206ENST00000446987 DYRK3O43781 588 aa13.07□□□□□ -0.32
DDX56-206ENST00000446987 ICMTO60725 284 aa13.07□□□□□ -0.32
DDX56-206ENST00000446987 DEAF1O75398 565 aaPredicted RBP13.07□□□□□ -0.32
DDX56-206ENST00000446987 MOSPD3O75425 235 aa13.07□□□□□ -0.32
DDX56-206ENST00000446987 DNAJB5O75953 348 aa13.07□□□□□ -0.32
DDX56-206ENST00000446987 CALCAP01258 141 aa13.07□□□□□ -0.32
DDX56-206ENST00000446987 CCDC159P0C7I6 412 aa13.07□□□□□ -0.32
DDX56-206ENST00000446987 UNGP13051 313 aaPredicted RBP13.07□□□□□ -0.32
DDX56-206ENST00000446987 ZNF182P17025 639 aaPredicted RBP13.07□□□□□ -0.32
DDX56-206ENST00000446987 BDNFP23560 247 aa13.07□□□□□ -0.32
DDX56-206ENST00000446987 TBXAS1P24557 533 aaPredicted RBP13.07□□□□□ -0.32
DDX56-206ENST00000446987 PRKCHP24723 683 aa13.07□□□□□ -0.32
DDX56-206ENST00000446987 IDUAP35475 653 aa13.07□□□□□ -0.32
DDX56-206ENST00000446987 MTHFRP42898 656 aa13.07□□□□□ -0.32
DDX56-206ENST00000446987 MAGEA11P43364 429 aa13.07□□□□□ -0.32
DDX56-206ENST00000446987 SLC1A6P48664 564 aa13.07□□□□□ -0.32
DDX56-206ENST00000446987 SERPINB9P50453 376 aa13.07□□□□□ -0.32
DDX56-206ENST00000446987 HK2P52789 917 aa13.07□□□□□ -0.32
DDX56-206ENST00000446987 EPHA5P54756 1037 aa13.07□□□□□ -0.32
DDX56-206ENST00000446987 ZP2Q05996 745 aa13.07□□□□□ -0.32
DDX56-206ENST00000446987 MAPRE1Q15691 268 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms