RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 FATE1Q969F0 183 aa12.58□□□□□ -0.4
TRO-215ENST00000445561 TUBGCP3Q96CW5 907 aa12.58□□□□□ -0.4
TRO-215ENST00000445561 ZNF597Q96LX8 424 aa12.58□□□□□ -0.4
TRO-215ENST00000445561 SEPT5Q99719 369 aaPredicted RBP12.58□□□□□ -0.4
TRO-215ENST00000445561 CRISPLD1Q9H336 500 aa12.58□□□□□ -0.4
TRO-215ENST00000445561 EPB41L1Q9H4G0 881 aa12.58□□□□□ -0.4
TRO-215ENST00000445561 CCSER2Q9H7U1 834 aa12.58□□□□□ -0.4
TRO-215ENST00000445561 RRAGCQ9HB90 399 aa12.58□□□□□ -0.4
TRO-215ENST00000445561 SEMA4BQ9NPR2 832 aaPredicted RBP12.58□□□□□ -0.4
TRO-215ENST00000445561 MRGBPQ9NV56 204 aa12.58□□□□□ -0.4
TRO-215ENST00000445561 PCDHB5Q9Y5E4 795 aa12.58□□□□□ -0.4
TRO-215ENST00000445561 AKAP10O43572 662 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 CLASP2O75122 1294 aaKnown RBP12.57□□□□□ -0.4
TRO-215ENST00000445561 RTN3O95197 1032 aaPredicted RBP12.57□□□□□ -0.4
TRO-215ENST00000445561 UGT1A6P19224 532 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 FMO4P31512 558 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 SOX11P35716 441 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 KCNQ1P51787 676 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 ACVR1Q04771 509 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 DYNC1I2Q13409 638 aaKnown RBP12.57□□□□□ -0.4
TRO-215ENST00000445561 NFE2Q16621 373 aaPredicted RBP12.57□□□□□ -0.4
TRO-215ENST00000445561 PARP15Q460N3 678 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 CTXN3Q4LDR2 81 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 PAQR3Q6TCH7 311 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 COLGALT2Q8IYK4 626 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 DIS3LQ8TF46 1054 aaKnown RBP12.57□□□□□ -0.4
TRO-215ENST00000445561 PBXIP1Q96AQ6 731 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 FUBP3Q96I24 572 aaKnown RBP eCLIP12.57□□□□□ -0.4
TRO-215ENST00000445561 ZNF512Q96ME7 567 aaPredicted RBP12.57□□□□□ -0.4
TRO-215ENST00000445561 NSMCE3Q96MG7 304 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 ATOH8Q96SQ7 321 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 UPF3AQ9H1J1 476 aaKnown RBP12.57□□□□□ -0.4
TRO-215ENST00000445561 OCEL1Q9H607 264 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 CNOT11Q9UKZ1 510 aaKnown RBP12.57□□□□□ -0.4
TRO-215ENST00000445561 AURKCQ9UQB9 309 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 TIMM22Q9Y584 194 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 LAMA2P24043 3122 aaKnown RBP12.57□□□□□ -0.4
TRO-215ENST00000445561 DRGXA6NNA5 263 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 SUPT3HB4E1H0 165 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 PRAMEF11O60813 436 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 SUPT3HO75486 399 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 PENKP01210 267 aaPredicted RBP12.57□□□□□ -0.4
TRO-215ENST00000445561 HGFP14210 728 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 EEF1DP29692 281 aaKnown RBP12.57□□□□□ -0.4
TRO-215ENST00000445561 STC1P52823 247 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 DSC1Q08554 894 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 APOFQ13790 326 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 MFSD14CQ5VZR4 134 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 RAB44Q7Z6P3 723 aaPredicted RBP12.57□□□□□ -0.4
TRO-215ENST00000445561 SPPL2CQ8IUH8 684 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 PHYKPLQ8IUZ5 450 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 BRSK1Q8TDC3 778 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 ZFRQ96KR1 1074 aaKnown RBP12.57□□□□□ -0.4
TRO-215ENST00000445561 TMEM79Q9BSE2 394 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 AARSD1Q9BTE6 412 aaKnown RBP12.57□□□□□ -0.4
TRO-215ENST00000445561 RBM38Q9H0Z9 239 aaKnown RBP12.57□□□□□ -0.4
TRO-215ENST00000445561 NDUFA13Q9P0J0 144 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 POLG2Q9UHN1 485 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 FNDC3AQ9Y2H6 1198 aaKnown RBP12.57□□□□□ -0.4
TRO-215ENST00000445561 SPO11Q9Y5K1 396 aa12.57□□□□□ -0.4
TRO-215ENST00000445561 LAMA3Q16787 3333 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 FAM149AA5PLN7 773 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 MANSC4A6NHS7 340 aaPredicted RBP12.56□□□□□ -0.4
TRO-215ENST00000445561 PLOD2O00469 737 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 SOCS2O14508 198 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 TPST1O60507 370 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 RHOBTB1O94844 696 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 FGF1P05230 155 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 HLA-DPA1P20036 260 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 RPL10P27635 214 aaKnown RBP12.56□□□□□ -0.4
TRO-215ENST00000445561 CCND3P30281 292 aaPredicted RBP12.56□□□□□ -0.4
TRO-215ENST00000445561 RGRP47804 291 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 CDKN1CP49918 316 aaPredicted RBP12.56□□□□□ -0.4
TRO-215ENST00000445561 ATP4BP51164 291 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 APLP1P51693 650 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 DIO3P55073 304 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 TSNQ15631 228 aaKnown RBP12.56□□□□□ -0.4
TRO-215ENST00000445561 KANK2Q63ZY3 851 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 MIER2Q8N344 545 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 PCYOX1LQ8NBM8 494 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 OR7D4Q8NG98 312 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 OR2T34Q8NGX1 318 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 OR2T3Q8NH03 318 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 LINC01599Q8WXQ3 324 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 CDKN2AIPNLQ96HQ2 116 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 FEM1CQ96JP0 617 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 GALPQ9UBC7 116 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 RNF112Q9ULX5 631 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 MED16Q9Y2X0 877 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 A0A0U1RQS6 177 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 SAC3D1A6NKF1 404 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 SEPT4O43236 478 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 SERPINF2P08697 491 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 PAX3P23760 479 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 PRDX3P30048 256 aaKnown RBP12.56□□□□□ -0.4
TRO-215ENST00000445561 FLT3LGP49771 235 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 SUOXP51687 545 aa12.56□□□□□ -0.4
TRO-215ENST00000445561 TRIM71Q2Q1W2 868 aaKnown RBP12.56□□□□□ -0.4
TRO-215ENST00000445561 SETMARQ53H47 684 aaPredicted RBP12.56□□□□□ -0.4
TRO-215ENST00000445561 FAM171A1Q5VUB5 890 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms