RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 T-ENOLP0DO92 83 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 ETV4P43268 484 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 DENND1CQ8IV53 801 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 OR2T12Q8NG77 320 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 TOP1MTQ969P6 601 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 TMEM159Q96B96 161 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 PLEKHA8Q96JA3 519 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 PADI3Q9ULW8 664 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 NEMP2A6NFY4 417 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 PCNAP12004 261 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 TAF10Q12962 218 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 ARHGAP15Q53QZ3 475 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 GLYATQ6IB77 296 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 EP400NLQ6ZTU2 488 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 STX19Q8N4C7 294 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 ZDHHC2Q9UIJ5 367 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 PNMA8BQ9ULN7 279 aaPredicted RBP16.61■□□□□ 0.25
TCOF1-206ENST00000445265 ADAMTS5Q9UNA0 930 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 SLC27A5Q9Y2P5 690 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 PRMT5O14744 637 aaPredicted RBP16.61■□□□□ 0.25
TCOF1-206ENST00000445265 CLDN11O75508 207 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 PARNO95453 639 aaKnown RBP16.61■□□□□ 0.25
TCOF1-206ENST00000445265 OGNP20774 298 aaKnown RBP16.61■□□□□ 0.25
TCOF1-206ENST00000445265 LIPEQ05469 1076 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 IL10RBQ08334 325 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 LPIN1Q14693 890 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 LYPLAL1Q5VWZ2 237 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 STEAP4Q687X5 459 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 DHRS4Q9BTZ2 278 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 KLHL25Q9H0H3 589 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 ALG2Q9H553 416 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 TLE6Q9H808 572 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 RPS6KA6Q9UK32 745 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 DNAJA2O60884 412 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 IMPDH1P20839 514 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 CHRNA4P43681 627 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 RABGGTBP53611 331 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 CCDC103Q8IW40 242 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 HMCESQ96FZ2 354 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 PLEKHG4BQ96PX9 1271 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 RNF39Q9H2S5 420 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 PLK2Q9NYY3 685 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 TIMM22Q9Y584 194 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 NPEPPSL1A6NEC2 478 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 CCL22O00626 93 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 H6PDO95479 791 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 MTTPP55157 894 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 SMARCB1Q12824 385 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 DLG1Q12959 904 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 RBFAQ8N0V3 343 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 BPIFB6Q8NFQ5 453 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 OR7A2PQ8NGA2 310 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 KIFC1Q9BW19 673 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 STBD1O95210 358 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 OR4Q2P0C623 313 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 UROSP10746 265 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 TYMPP19971 482 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 MAPKAPK2P49137 400 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 RGS21Q2M5E4 152 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 DNAJC1Q96KC8 554 aaKnown RBP16.6■□□□□ 0.25
TCOF1-206ENST00000445265 GPR21Q99679 349 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 NUSAP1Q9BXS6 441 aaKnown RBP16.6■□□□□ 0.25
TCOF1-206ENST00000445265 FTHL17Q9BXU8 183 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 ZBTB26Q9HCK0 441 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 SUCOQ9UBS9 1254 aaKnown RBP16.6■□□□□ 0.25
TCOF1-206ENST00000445265 MAPRE3Q9UPY8 281 aa16.6■□□□□ 0.25
TCOF1-206ENST00000445265 IFRD1O00458 451 aaPredicted RBP16.59■□□□□ 0.25
TCOF1-206ENST00000445265 PIP5K1BO14986 540 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 CXCR3P49682 368 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 IFNLR1Q8IU57 520 aaPredicted RBP16.59■□□□□ 0.25
TCOF1-206ENST00000445265 BRSK1Q8TDC3 778 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 UTP15Q8TED0 518 aaKnown RBP16.59■□□□□ 0.25
TCOF1-206ENST00000445265 BBS2Q9BXC9 721 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 ATAD3AQ9NVI7 634 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 FNIP2Q9P278 1114 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 AQP12BA6NM10 295 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 HCRTO43612 131 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 GOT2P00505 430 aaKnown RBP16.59■□□□□ 0.25
TCOF1-206ENST00000445265 RPS9P46781 194 aaKnown RBP16.59■□□□□ 0.25
TCOF1-206ENST00000445265 TLDC1Q6P9B6 456 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 ARHGAP36Q6ZRI8 547 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 NECAB2Q7Z6G3 386 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 AQP12AQ8IXF9 295 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 TPD52L3Q96J77 140 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 PCDHB9Q9Y5E1 797 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 PCDHB1Q9Y5F3 818 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 A8MT66 165 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 PIRO00625 290 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 RGS5O15539 181 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 SNNO75324 88 aaPredicted RBP16.59■□□□□ 0.25
TCOF1-206ENST00000445265 POU1F1P28069 291 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 INHBEP58166 350 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 IRF8Q02556 426 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 SLC10A2Q12908 348 aaPredicted RBP16.59■□□□□ 0.25
TCOF1-206ENST00000445265 PABPC1LQ4VXU2 614 aaKnown RBP16.59■□□□□ 0.25
TCOF1-206ENST00000445265 TIGD5Q53EQ6 642 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 ZC3H12BQ5HYM0 836 aaKnown RBP16.59■□□□□ 0.25
TCOF1-206ENST00000445265 USP45Q70EL2 814 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 OSTM1Q86WC4 334 aa16.59■□□□□ 0.25
TCOF1-206ENST00000445265 TMEM126BQ8IUX1 230 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms