RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 TTC39CQ8N584 583 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 ELP5Q8TE02 316 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 FAM216AQ8WUB2 273 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 WASF1Q92558 559 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 ZKSCAN4Q969J2 545 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 C1orf74Q96LT6 269 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 CMTM3Q96MX0 182 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 ACOX2Q99424 681 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 IFIH1Q9BYX4 1025 aaKnown RBP4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 IL25Q9H293 177 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 LTB4R2Q9NPC1 389 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 NOX4Q9NPH5 578 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 CNGB3Q9NQW8 809 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 FGD6Q6ZV73 1430 aa4.55□□□□□ -1.68
HMGB3P6-201ENST00000444896 C1orf226A1L170 272 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 AKR1B15C9JRZ8 316 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 SOCS6O14544 535 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 PLRG1O43660 514 aaKnown RBP4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 HNRNPCL1O60812 293 aaKnown RBP4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 SLC25A12O75746 678 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 PRSS2P07478 247 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 NGFRP08138 427 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 PLA2G2AP14555 144 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 DDX5P17844 614 aaKnown RBP4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 STX2P32856 288 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 GARSP41250 739 aaKnown RBP4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 DRG2P55039 364 aaKnown RBP4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 EGR4Q05215 589 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 DDR1Q08345 913 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 GRSF1Q12849 480 aaKnown RBP eCLIP4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 AMZ1Q400G9 498 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 GKAP1Q5VSY0 366 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 GGNBP1Q5YKI7 109 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 ITPRIPL1Q6GPH6 555 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 JADE1Q6IE81 842 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 CRELD2Q6UXH1 353 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 CLEC17AQ6ZS10 378 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 DPPA4Q7L190 304 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 CHERPQ8IWX8 916 aaKnown RBP4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 C9orf106Q8NAJ2 232 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 ZNF114Q8NC26 417 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 SCFD2Q8WU76 684 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 TMED6Q8WW62 240 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 RRNAD1Q96FB5 475 aaKnown RBP4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 SCMH1Q96GD3 660 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 LYZL4Q96KX0 146 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 CSF3RQ99062 836 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 SEPT5Q99719 369 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 MMTAG2Q9BU76 263 aaKnown RBP4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 SLC28A3Q9HAS3 691 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 RRP7BPQ9NSQ0 103 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 OCIAD1Q9NX40 245 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 WNT16Q9UBV4 365 aa4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 LAS1LQ9Y4W2 734 aaKnown RBP4.54□□□□□ -1.68
HMGB3P6-201ENST00000444896 ATXN2Q99700 1313 aaKnown RBP4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 A6NCN8 305 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 AGAP14A8MT82 685 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 MYO1GB0I1T2 1018 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 PTGES3LE9PB15 166 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 GTPBP1O00178 669 aaKnown RBP4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 HCRTR2O43614 444 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 DDNO94850 711 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 IGHV4-30-4P0DP06 118 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 TNFRSF8P28908 595 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 HOXD13P35453 343 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 CASP2P42575 452 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 TRAF2Q12933 501 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 HNRNPA0Q13151 305 aaKnown RBP4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 MEA1Q16626 185 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 XKR9Q5GH70 373 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 LRIF1Q5T3J3 769 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 PMS2CLQ68D20 193 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 SIGIRRQ6IA17 410 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 SARM1Q6SZW1 724 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 SEPT14Q6ZU15 432 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 WFIKKN2Q8TEU8 576 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 SGCDQ92629 289 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 RHBDF1Q96CC6 855 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 SH3GL2Q99962 352 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 ZPBPQ9BS86 351 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 PCGF1Q9BSM1 259 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 TMEM204Q9BSN7 226 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 SEZ6LQ9BYH1 1024 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 FTOQ9C0B1 505 aaKnown RBP eCLIP4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 KAT14Q9H8E8 782 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 C17orf75Q9HAS0 396 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 ACSS1Q9NUB1 689 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 TTC7AQ9ULT0 858 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 MAU2Q9Y6X3 613 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 NCOA2Q15596 1464 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 MYOM3Q5VTT5 1437 aa4.53□□□□□ -1.68
HMGB3P6-201ENST00000444896 MAPKBP1O60336 1514 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 UGGT2Q9NYU1 1516 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 ERCC6Q03468 1493 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 IGKV2D-30A0A075B6S6 120 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 ANKRD18BA2A2Z9 1011 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 LACTBL1A8MY62 500 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 PROB1E7EW31 1015 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 AP3D1O14617 1153 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms