RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 RNPEPL1Q9HAU8 725 aa7.99□□□□□ -1.13
RIF1-205ENST00000444746 HBS1LQ9Y450 684 aaKnown RBP7.99□□□□□ -1.13
RIF1-205ENST00000444746 TRIM38O00635 465 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 NRP1O14786 923 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 FSBPO95073 299 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 NR2F1P10589 423 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 HPCAL1P37235 193 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 CSKP41240 450 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 PTSQ03393 145 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 PPIDQ08752 370 aaKnown RBP7.98□□□□□ -1.13
RIF1-205ENST00000444746 FAM110CQ1W6H9 321 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 ARL13AQ5H913 290 aaPredicted RBP7.98□□□□□ -1.13
RIF1-205ENST00000444746 ZDHHC24Q6UX98 284 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 CFAP206Q8IYR0 622 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 POMGNT2Q8NAT1 580 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 KCT2Q8NC54 265 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 HEXDCQ8WVB3 486 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 TWIST2Q8WVJ9 160 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 EXOSC8Q96B26 276 aaKnown RBP7.98□□□□□ -1.13
RIF1-205ENST00000444746 SLC47A1Q96FL8 570 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 YIPF4Q9BSR8 244 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 TRIM8Q9BZR9 551 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 PCDH10Q9P2E7 1040 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 PCDHA2Q9Y5H9 948 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 PTCH2Q9Y6C5 1203 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 GRIN2DO15399 1336 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 RGSL1A5PLK6 1076 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 DNM1LO00429 736 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 RASGRP1O95267 797 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 SIX3O95343 332 aaPredicted RBP7.98□□□□□ -1.13
RIF1-205ENST00000444746 LYPLA2O95372 231 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 TSPAN19P0C672 248 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 SLC20A2Q08357 652 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 MSS51Q4VC12 460 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 ZNF648Q5T619 568 aaPredicted RBP7.98□□□□□ -1.13
RIF1-205ENST00000444746 RNF220Q5VTB9 566 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 IQCKQ8N0W5 287 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 LRTOMTQ8WZ04 291 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 LHX5Q9H2C1 402 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 REEP1Q9H902 201 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 ABCB8Q9NUT2 735 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 DTLQ9NZJ0 730 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 ENTPD4Q9Y227 616 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 WASF2Q9Y6W5 498 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 hCG_2039718K7EN88 272 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 SLC31A1O15431 190 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 DHX15O43143 795 aaKnown RBP7.98□□□□□ -1.13
RIF1-205ENST00000444746 SLC28A2O43868 658 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 SNAP91O60641 907 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 BCL10O95999 233 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 GTF2E2P29084 291 aaKnown RBP7.98□□□□□ -1.13
RIF1-205ENST00000444746 PITX1P78337 314 aaPredicted RBP7.98□□□□□ -1.13
RIF1-205ENST00000444746 LSM12Q3MHD2 195 aaKnown RBP7.98□□□□□ -1.13
RIF1-205ENST00000444746 ARMC8Q8IUR7 673 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 LRRC52Q8N7C0 313 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 FAM13CQ8NE31 585 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 ACTRT2Q8TDY3 377 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 SMG7Q92540 1137 aaKnown RBP7.98□□□□□ -1.13
RIF1-205ENST00000444746 RNFT2Q96EX2 444 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 KLHL32Q96NJ5 620 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 ZNF184Q99676 751 aaPredicted RBP7.98□□□□□ -1.13
RIF1-205ENST00000444746 BDH2Q9BUT1 245 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 ARHGAP39Q9C0H5 1083 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 KCND1Q9NSA2 647 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 RAB23Q9ULC3 237 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.98□□□□□ -1.13
RIF1-205ENST00000444746 A0A0G2JLL6 359 aaPredicted RBP7.98□□□□□ -1.13
RIF1-205ENST00000444746 CCDC189A1A4V9 331 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 H3BMM5 538 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 PIP5K1BO14986 540 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 HDAC3O15379 428 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 RPP40O75818 363 aaKnown RBP7.98□□□□□ -1.13
RIF1-205ENST00000444746 FADS2O95864 444 aaKnown RBP7.98□□□□□ -1.13
RIF1-205ENST00000444746 ALDH4A1P30038 563 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 RPL9P32969 192 aaKnown RBP7.98□□□□□ -1.13
RIF1-205ENST00000444746 CDK7P50613 346 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 DAOAP59103 153 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 INAQ16352 499 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 PABPC1LQ4VXU2 614 aaKnown RBP7.98□□□□□ -1.13
RIF1-205ENST00000444746 AKIRIN2Q53H80 203 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 REP15Q6BDI9 236 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 FSTL4Q6MZW2 842 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 PRRT2Q7Z6L0 340 aaPredicted RBP7.98□□□□□ -1.13
RIF1-205ENST00000444746 ZNF540Q8NDQ6 660 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 MRPL57Q9BQC6 102 aaKnown RBP7.98□□□□□ -1.13
RIF1-205ENST00000444746 SIKE1Q9BRV8 207 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 PLAGL1Q9UM63 463 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 SNX6Q9UNH7 406 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 POLR1DQ9Y2S0 133 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 PLLPQ9Y342 182 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 GMPPBQ9Y5P6 360 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 SNED1Q8TER0 1413 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 SHPRHQ149N8 1683 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 STX16-NPEPL1H3BU86 382 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 OR6A2O95222 327 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 ADH1AP07327 375 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 PPP2R1BP30154 601 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 CCNIQ14094 377 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 UAP1L1Q3KQV9 507 aa7.98□□□□□ -1.13
RIF1-205ENST00000444746 SAMD4BQ5PRF9 694 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms