RNA–Protein interactions for RNA: ENST00000444409.1

AP001062.3-202, humanhuman

TSL 2 BASIC

Gene AP001062.3, Length 619 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001062.3-202ENST00000444409 CCDC3Q9BQI4 270 aa13.62□□□□□ -0.23
AP001062.3-202ENST00000444409 MLPHQ9BV36 600 aaPredicted RBP13.62□□□□□ -0.23
AP001062.3-202ENST00000444409 ADGRE3Q9BY15 652 aa13.62□□□□□ -0.23
AP001062.3-202ENST00000444409 SLC25A51Q9H1U9 297 aa13.62□□□□□ -0.23
AP001062.3-202ENST00000444409 CARS2Q9HA77 564 aaKnown RBP13.62□□□□□ -0.23
AP001062.3-202ENST00000444409 GOLGA6AQ9NYA3 693 aa13.62□□□□□ -0.23
AP001062.3-202ENST00000444409 SEPT10Q9P0V9 454 aa13.62□□□□□ -0.23
AP001062.3-202ENST00000444409 SAE1Q9UBE0 346 aaPredicted RBP13.62□□□□□ -0.23
AP001062.3-202ENST00000444409 MOSPD1Q9UJG1 213 aa13.62□□□□□ -0.23
AP001062.3-202ENST00000444409 A0A087WV48 116 aa13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 C1orf232A0A0U1RR37 186 aa13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 NTN3O00634 580 aaPredicted RBP13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 CASC3O15234 703 aaKnown RBP13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 NOBOXO60393 691 aa13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 BRINP1O60477 761 aa13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 USP12O75317 370 aa13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 IVLP07476 585 aa13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 PTPN3P26045 913 aa13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 LLGL1Q15334 1064 aa13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 TEX44Q53QW1 395 aa13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 KAZNQ674X7 775 aa13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 RAD9BQ6WBX8 426 aa13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 RBM44Q6ZP01 1051 aaKnown RBP13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 B4GALNT4Q76KP1 1039 aa13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 NRROSQ86YC3 692 aa13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 FAM46DQ8NEK8 389 aa13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 OR6C4Q8NGE1 309 aa13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 EXD1Q8NHP7 514 aa13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 PTCD2Q8WV60 388 aaKnown RBP13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 TFB1MQ8WVM0 346 aaKnown RBP13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 KRT35Q92764 455 aa13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 CCDC74AQ96AQ1 378 aa13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 SCARF2Q96GP6 870 aaPredicted RBP13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 AGAP2Q99490 1192 aa13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 RIOK2Q9BVS4 552 aaKnown RBP13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 TRNAU1APQ9NX07 287 aaKnown RBP13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 RABGEF1Q9UJ41 708 aa13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 SUFUQ9UMX1 484 aa13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 REXO2Q9Y3B8 237 aaKnown RBP13.61□□□□□ -0.23
AP001062.3-202ENST00000444409 RGSL1A5PLK6 1076 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 BTNL10A8MVZ5 291 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 TLX3O43711 291 aaPredicted RBP13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 IPO7O95373 1038 aaKnown RBP13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 GNPDA1P46926 289 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 POLD2P49005 469 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 SPINT3P49223 89 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 PDX1P52945 283 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 WASHC5Q12768 1159 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 ILF3Q12906 894 aaKnown RBP eCLIP13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 GALNT3Q14435 633 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 PPP2R5EQ16537 467 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 CERCAMQ5T4B2 595 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 SFTPA2Q8IWL1 248 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 SNIP1Q8TAD8 396 aaKnown RBP13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 P3H4Q92791 437 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 EID2BQ96D98 161 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 COX14Q96I36 57 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 RBM41Q96IZ5 413 aaKnown RBP13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 HIC2Q96JB3 615 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 TEKT5Q96M29 485 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 WDR24Q96S15 920 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 GSDMCQ9BYG8 508 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 DPEP2Q9H4A9 486 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 GLOD4Q9HC38 313 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 ENTPD2Q9Y5L3 495 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 ST14Q9Y5Y6 855 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 DUSP10Q9Y6W6 482 aa13.6□□□□□ -0.23
AP001062.3-202ENST00000444409 LOC400499M0QZD8 3231 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 B4DGG1 531 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 MTSS1O43312 755 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 DXOO77932 396 aaKnown RBP13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 MT-CYBP00156 380 aaPredicted RBP13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 MPOP05164 745 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 PNLIPP16233 465 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 GLB1P16278 677 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 CD68P34810 354 aaPredicted RBP13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 CTNNA1P35221 906 aaKnown RBP13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 EIF2S3P41091 472 aaKnown RBP13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 LSSP48449 732 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 GABREP78334 506 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 CDK18Q07002 472 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 SPIDRQ14159 915 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 HLTFQ14527 1009 aaKnown RBP eCLIP13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 TBC1D25Q3MII6 688 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 C14orf28Q4W4Y0 310 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 HENMT1Q5T8I9 393 aaKnown RBP13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 DOK6Q6PKX4 331 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 BBS12Q6ZW61 710 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 LYSMD3Q7Z3D4 306 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 KDELC2Q7Z4H8 507 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 TRIM74Q86UV6 250 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 ZC3H18Q86VM9 953 aaKnown RBP13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 CCDC50Q8IVM0 306 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 LSMEM2Q8N112 164 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 SPATA22Q8NHS9 363 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 KIAA1524Q8TCG1 905 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 CCHCR1Q8TD31 782 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 FGF11Q92914 225 aa13.59□□□□□ -0.23
AP001062.3-202ENST00000444409 ATXN7L3BQ96GX2 97 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms