RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 PRKCGP05129 697 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 PDHA1P08559 390 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 DLDP09622 509 aaKnown RBP6.01□□□□□ -1.45
VPS50-205ENST00000441602 TFEBP19484 476 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 HLA-FP30511 346 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 FMO4P31512 558 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 SLC8A1P32418 973 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 GLRBP48167 497 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 CRY1Q16526 586 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 ATAT1Q5SQI0 421 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 ERAP2Q6P179 960 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 LYSMD3Q7Z3D4 306 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 HCAR2Q8TDS4 363 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 TIFAQ96CG3 184 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 MRPL38Q96DV4 380 aaKnown RBP6.01□□□□□ -1.45
VPS50-205ENST00000441602 CNDP1Q96KN2 507 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 GATA5Q9BWX5 397 aaPredicted RBP6.01□□□□□ -1.45
VPS50-205ENST00000441602 ZFP14Q9HCL3 533 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 INTS6Q9UL03 887 aaKnown RBP6.01□□□□□ -1.45
VPS50-205ENST00000441602 FNDC3AQ9Y2H6 1198 aaKnown RBP6.01□□□□□ -1.45
VPS50-205ENST00000441602 CRYL1Q9Y2S2 319 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 PTPRSQ13332 1948 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 MIA3Q5JRA6 1907 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 GLYATL1P3A0A0U1RQE8 302 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 K7ERQ8 282 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 QSOX1O00391 747 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 CCL22O00626 93 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 SMAD6O43541 496 aaKnown RBP6.01□□□□□ -1.45
VPS50-205ENST00000441602 PIGNO95427 931 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 PRNPP04156 253 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 CYP17A1P05093 508 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 RPS3P23396 243 aaKnown RBP eCLIP6.01□□□□□ -1.45
VPS50-205ENST00000441602 SUOXP51687 545 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 AQP5P55064 265 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 ZXDBP98169 803 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 PFKPQ01813 784 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 CAMK1Q14012 370 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 CGB2Q6NT52 195 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 ZCCHC23Q6ZST2 131 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 GET4Q7L5D6 327 aaPredicted RBP6.01□□□□□ -1.45
VPS50-205ENST00000441602 GPR149Q86SP6 731 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 PLD6Q8N2A8 252 aaKnown RBP6.01□□□□□ -1.45
VPS50-205ENST00000441602 MDGA1Q8NFP4 955 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 OR6K2Q8NGY2 324 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 STAG3L4Q8TBR4 150 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 STON2Q8WXE9 905 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 OR8D1Q8WZ84 308 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 LPGAT1Q92604 370 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 DCUN1D1Q96GG9 259 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 PANX3Q96QZ0 392 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 LYSMD1Q96S90 227 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 C1QTNF1Q9BXJ1 281 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 DRC3Q9H069 523 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 RASSF4Q9H2L5 321 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 IGFLR1Q9H665 355 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 ASB8Q9H765 288 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 SUDS3Q9H7L9 328 aaPredicted RBP6.01□□□□□ -1.45
VPS50-205ENST00000441602 DYRK4Q9NR20 520 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 CDH7Q9ULB5 785 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 STK38LQ9Y2H1 464 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 SLC27A6Q9Y2P4 619 aa6.01□□□□□ -1.45
VPS50-205ENST00000441602 YBX2Q9Y2T7 364 aaKnown RBP6.01□□□□□ -1.45
VPS50-205ENST00000441602 RGSL1A5PLK6 1076 aa6□□□□□ -1.45
VPS50-205ENST00000441602 G3V2L1 256 aa6□□□□□ -1.45
VPS50-205ENST00000441602 SNX2O60749 519 aa6□□□□□ -1.45
VPS50-205ENST00000441602 UGT2B4P06133 528 aa6□□□□□ -1.45
VPS50-205ENST00000441602 CHRM3P20309 590 aa6□□□□□ -1.45
VPS50-205ENST00000441602 VIPR1P32241 457 aa6□□□□□ -1.45
VPS50-205ENST00000441602 MTHFRP42898 656 aa6□□□□□ -1.45
VPS50-205ENST00000441602 IL2P60568 153 aa6□□□□□ -1.45
VPS50-205ENST00000441602 BNIP1Q12981 228 aa6□□□□□ -1.45
VPS50-205ENST00000441602 ZNF284Q2VY69 593 aa6□□□□□ -1.45
VPS50-205ENST00000441602 FNDC3BQ53EP0 1204 aaKnown RBP6□□□□□ -1.45
VPS50-205ENST00000441602 TECRLQ5HYJ1 363 aa6□□□□□ -1.45
VPS50-205ENST00000441602 TXNDC11Q6PKC3 985 aa6□□□□□ -1.45
VPS50-205ENST00000441602 CEP97Q8IW35 865 aa6□□□□□ -1.45
VPS50-205ENST00000441602 ADGRG2Q8IZP9 1017 aa6□□□□□ -1.45
VPS50-205ENST00000441602 C12orf76Q8N812 135 aaPredicted RBP6□□□□□ -1.45
VPS50-205ENST00000441602 RFWD2Q8NHY2 731 aa6□□□□□ -1.45
VPS50-205ENST00000441602 ITFG1Q8TB96 612 aa6□□□□□ -1.45
VPS50-205ENST00000441602 KCNJ9Q92806 393 aa6□□□□□ -1.45
VPS50-205ENST00000441602 PPP1R16AQ96I34 528 aa6□□□□□ -1.45
VPS50-205ENST00000441602 LMLNQ96KR4 655 aa6□□□□□ -1.45
VPS50-205ENST00000441602 RPL10LQ96L21 214 aaKnown RBP6□□□□□ -1.45
VPS50-205ENST00000441602 MYLK2Q9H1R3 596 aa6□□□□□ -1.45
VPS50-205ENST00000441602 LINC00597Q9H2U6 94 aa6□□□□□ -1.45
VPS50-205ENST00000441602 POMKQ9H5K3 350 aa6□□□□□ -1.45
VPS50-205ENST00000441602 CERS4Q9HA82 394 aa6□□□□□ -1.45
VPS50-205ENST00000441602 ZNF358Q9NW07 568 aa6□□□□□ -1.45
VPS50-205ENST00000441602 SUN2Q9UH99 717 aa6□□□□□ -1.45
VPS50-205ENST00000441602 RNF112Q9ULX5 631 aa6□□□□□ -1.45
VPS50-205ENST00000441602 EDDM13A0A1B0GTR0 161 aa6□□□□□ -1.45
VPS50-205ENST00000441602 HEPACAM2A8MVW5 462 aa6□□□□□ -1.45
VPS50-205ENST00000441602 UPK3BL1B0FP48 263 aa6□□□□□ -1.45
VPS50-205ENST00000441602 SUPT3HB4E1H0 165 aa6□□□□□ -1.45
VPS50-205ENST00000441602 UPK3BL2E5RIL1 263 aa6□□□□□ -1.45
VPS50-205ENST00000441602 SPECC1L-ADORA2AF8WAN1 911 aa6□□□□□ -1.45
VPS50-205ENST00000441602 FCHO1O14526 889 aa6□□□□□ -1.45
VPS50-205ENST00000441602 SUPT3HO75486 399 aa6□□□□□ -1.45
VPS50-205ENST00000441602 GJB3O75712 270 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms