RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 NPIPB15A6NHN6 443 aaPredicted RBP16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 AGAP14A8MT82 685 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 TARM1B6A8C7 271 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 ARNTLO00327 626 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 GAPDHSO14556 408 aaPredicted RBP16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 LEFTY1O75610 366 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 TGDSO95455 350 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 NEFHP12036 1026 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 CPA3P15088 417 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 ZNF30P17039 623 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 ALDH3A1P30838 453 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 PPARGP37231 505 aaPredicted RBP16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 PTGER3P43115 390 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 KPNA2P52292 529 aaKnown RBP16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 PCLAFQ15004 111 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 HNRNPA1L2Q32P51 320 aaKnown RBP16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 GPR33Q49SQ1 333 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 ZNF805Q5CZA5 627 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 ARSIQ5FYB1 569 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 CGB2Q6NT52 195 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 PSAPL1Q6NUJ1 521 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 C6orf89Q6UWU4 347 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 FAM47EQ6ZV65 393 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 OTOAQ7RTW8 1153 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 STK40Q8N2I9 435 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 PNPLA1Q8N8W4 532 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 CCDC63Q8NA47 563 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 SMRP1Q8NCR6 262 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 OR6Y1Q8NGX8 325 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 UCMAQ8WVF2 138 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.96■□□□□ 0.33e-8■■■■■ 70.6
TMEM39B-203ENST00000441402 NDNQ99608 321 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 MECRQ9BV79 373 aa16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 TRMT61BQ9BVS5 477 aaKnown RBP16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 USP15Q9Y4E8 981 aaPredicted RBP16.96■□□□□ 0.3
TMEM39B-203ENST00000441402 ZNF106Q9H2Y7 1883 aaKnown RBP16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 SCN8AQ9UQD0 1980 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 COL4A3Q01955 1670 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 A0A0U1RQS6 177 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 EDDM13A0A1B0GTR0 161 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 G3V2L1 256 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 SNNO75324 88 aaPredicted RBP16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 SRP72O76094 671 aaKnown RBP16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 CTSLP07711 333 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 PRSS56P0CW18 603 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 BMP1P13497 986 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 BPIP17213 487 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 GMPRP36959 345 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 PRKAA2P54646 552 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 CDKN2DP55273 166 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 TIAL1Q01085 375 aaKnown RBP eCLIP16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 PTSQ03393 145 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 GRM2Q14416 872 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 FAM83EQ2M2I3 478 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 ITPRIPL2Q3MIP1 535 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 ZRANB3Q5FWF4 1079 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 LYPLAL1Q5VWZ2 237 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 SPATA21Q7Z572 469 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 SNX20Q7Z614 316 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 TBC1D1Q86TI0 1168 aaPredicted RBP16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 ANKS4BQ8N8V4 417 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 TMIEQ8NEW7 156 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 DTX3LQ8TDB6 740 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 KCTD4Q8WVF5 259 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 SUSD6Q92537 303 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 NXNL1Q96CM4 212 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 C7orf26Q96N11 449 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 KXD1Q9BQD3 176 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 PLCD4Q9BRC7 762 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 TSSK1BQ9BXA7 367 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 TTYH1Q9H313 450 aaPredicted RBP16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 TMEM245Q9H330 911 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 GPAMQ9HCL2 828 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 IL26Q9NPH9 171 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 GTSE1Q9NYZ3 720 aa16.95■□□□□ 0.3
TMEM39B-203ENST00000441402 MUC22E2RYF6 1773 aaPredicted RBP16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 ANHXE9PGG2 379 aa16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 SLC4A1P02730 911 aa16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 LTA4HP09960 611 aaKnown RBP16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 FGF3P11487 239 aaPredicted RBP16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 CYP2A6P11509 494 aaPredicted RBP16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 TIMP2P16035 220 aa16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 GRK2P25098 689 aa16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 GDI1P31150 447 aa16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 SPAM1P38567 509 aa16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 GRIA2P42262 883 aa16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 RGS19P49795 217 aa16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 CDKN1CP49918 316 aaPredicted RBP16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 IRX4P78413 519 aa16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 BST1Q10588 318 aa16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 DLG1Q12959 904 aa16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 ZNF460Q14592 562 aa16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 GRIN2CQ14957 1233 aa16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 CHI3L2Q15782 390 aa16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 AGAP9Q5VTM2 703 aa16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 LRRC66Q68CR7 880 aa16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 NUDT18Q6ZVK8 323 aa16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 TSPAN33Q86UF1 283 aa16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 FSTL5Q8N475 847 aaPredicted RBP16.94■□□□□ 0.3
TMEM39B-203ENST00000441402 ST13P5Q8NFI4 369 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms