RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 CTAGE3PQ8IX95 158 aa20.64■□□□□ 0.89
CHD3-204ENST00000439235 UNC5BQ8IZJ1 945 aa20.64■□□□□ 0.89
CHD3-204ENST00000439235 IQCKQ8N0W5 287 aa20.64■□□□□ 0.89
CHD3-204ENST00000439235 OTUD6BQ8N6M0 293 aa20.64■□□□□ 0.89
CHD3-204ENST00000439235 OR4L1Q8NH43 312 aa20.64■□□□□ 0.89
CHD3-204ENST00000439235 DTD2Q96FN9 168 aa20.64■□□□□ 0.89
CHD3-204ENST00000439235 RUFY1Q96T51 708 aa20.64■□□□□ 0.89
CHD3-204ENST00000439235 FAM83DQ9H4H8 585 aa20.64■□□□□ 0.89
CHD3-204ENST00000439235 CATSPERZQ9NTU4 200 aa20.64■□□□□ 0.89
CHD3-204ENST00000439235 SPATA6Q9NWH7 488 aaPredicted RBP20.64■□□□□ 0.89
CHD3-204ENST00000439235 IL1RAPL1Q9NZN1 696 aa20.64■□□□□ 0.89
CHD3-204ENST00000439235 FETUBQ9UGM5 382 aa20.64■□□□□ 0.89
CHD3-204ENST00000439235 EBF1Q9UH73 591 aa20.64■□□□□ 0.89
CHD3-204ENST00000439235 FNDC3AQ9Y2H6 1198 aaKnown RBP20.64■□□□□ 0.89
CHD3-204ENST00000439235 ATG2BQ96BY7 2078 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 PI15O43692 258 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 TM7SF2O76062 418 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 SHBGP04278 402 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 ETV3P41162 512 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 RPS21P63220 83 aaKnown RBP20.63■□□□□ 0.89
CHD3-204ENST00000439235 XIAPP98170 497 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 CREB5Q02930 508 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 SMAD1Q15797 465 aaKnown RBP20.63■□□□□ 0.89
CHD3-204ENST00000439235 ZNF284Q2VY69 593 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 FASTKD1Q53R41 847 aaKnown RBP20.63■□□□□ 0.89
CHD3-204ENST00000439235 AARS2Q5JTZ9 985 aaKnown RBP20.63■□□□□ 0.89
CHD3-204ENST00000439235 MRNIPQ6NTE8 343 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 FAM151BQ6UXP7 276 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 Q6ZVL8 140 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 MARK2Q7KZI7 788 aaKnown RBP20.63■□□□□ 0.89
CHD3-204ENST00000439235 PTAR1Q7Z6K3 402 aaPredicted RBP20.63■□□□□ 0.89
CHD3-204ENST00000439235 SLC26A11Q86WA9 606 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 LRRC6Q86X45 466 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 CNTN4Q8IWV2 1026 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 GPR26Q8NDV2 337 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 OR2T34Q8NGX1 318 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 DTX3LQ8TDB6 740 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 NUS1Q96E22 293 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 ACBD3Q9H3P7 528 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 SUDS3Q9H7L9 328 aaPredicted RBP20.63■□□□□ 0.89
CHD3-204ENST00000439235 IL26Q9NPH9 171 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 IARS2Q9NSE4 1012 aaKnown RBP20.63■□□□□ 0.89
CHD3-204ENST00000439235 VPS18Q9P253 973 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 TXNDC16Q9P2K2 825 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 CYP8B1Q9UNU6 501 aa20.63■□□□□ 0.89
CHD3-204ENST00000439235 TBC1D3DA0A087WVF3 549 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 TBC1D3IA0A087WXS9 549 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 TBC1D3EA0A087X179 549 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 TBC1D3KA0A087X1G2 549 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 TBC1D3FA6NER0 549 aaPredicted RBP20.62■□□□□ 0.89
CHD3-204ENST00000439235 OR51F1A6NGY5 319 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 TBC1D3LB9A6J9 549 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 GOLGA8KD6RF30 607 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 GOLGA8TH3BQL2 631 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 RNGTTO60942 597 aaKnown RBP20.62■□□□□ 0.89
CHD3-204ENST00000439235 SRP72O76094 671 aaKnown RBP20.62■□□□□ 0.89
CHD3-204ENST00000439235 RECQL5O94762 991 aaPredicted RBP20.62■□□□□ 0.89
CHD3-204ENST00000439235 PRAMEF1O95521 474 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 C1QAP02745 245 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 TBC1D3HP0C7X1 549 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 OGNP20774 298 aaKnown RBP20.62■□□□□ 0.89
CHD3-204ENST00000439235 FOXN2P32314 431 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 CACNG1Q06432 222 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 PEX6Q13608 980 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 ITGA9Q13797 1035 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 EFTUD2Q15029 972 aaKnown RBP eCLIP20.62■□□□□ 0.89
CHD3-204ENST00000439235 ZRANB3Q5FWF4 1079 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 TBC1D3GQ6DHY5 549 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 ZNF470Q6ECI4 717 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 TBC1D3CQ6IPX1 549 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 CROCCP2Q86T23 111 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 HORMAD1Q86X24 394 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 TBC1D3Q8IZP1 549 aaPredicted RBP20.62■□□□□ 0.89
CHD3-204ENST00000439235 PPM1NQ8N819 430 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 GPR150Q8NGU9 434 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 SCG3Q8WXD2 468 aaKnown RBP20.62■□□□□ 0.89
CHD3-204ENST00000439235 ZIM3Q96PE6 472 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 C1QTNF7Q9BXJ2 289 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 TPSD1Q9BZJ3 242 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 ROPN1BQ9BZX4 212 aaPredicted RBP20.62■□□□□ 0.89
CHD3-204ENST00000439235 ROPN1Q9HAT0 212 aaPredicted RBP20.62■□□□□ 0.89
CHD3-204ENST00000439235 IKBKGQ9Y6K9 419 aa20.62■□□□□ 0.89
CHD3-204ENST00000439235 A0A1W2PQU0 124 aa20.61■□□□□ 0.89
CHD3-204ENST00000439235 PRR23AA6NEV1 266 aa20.61■□□□□ 0.89
CHD3-204ENST00000439235 IGLON5A6NGN9 336 aa20.61■□□□□ 0.89
CHD3-204ENST00000439235 POC1B-GALNT4F8VUJ3 575 aa20.61■□□□□ 0.89
CHD3-204ENST00000439235 K7ESF4 209 aa20.61■□□□□ 0.89
CHD3-204ENST00000439235 PFDN6O15212 129 aa20.61■□□□□ 0.89
CHD3-204ENST00000439235 CD3EAPO15446 510 aaKnown RBP20.61■□□□□ 0.89
CHD3-204ENST00000439235 TCEA3O75764 348 aa20.61■□□□□ 0.89
CHD3-204ENST00000439235 SEMA4FO95754 770 aa20.61■□□□□ 0.89
CHD3-204ENST00000439235 GM2AP17900 193 aa20.61■□□□□ 0.89
CHD3-204ENST00000439235 CD6P30203 668 aa20.61■□□□□ 0.89
CHD3-204ENST00000439235 MSH2P43246 934 aa20.61■□□□□ 0.89
CHD3-204ENST00000439235 AGERQ15109 404 aa20.61■□□□□ 0.89
CHD3-204ENST00000439235 MAP7D1Q3KQU3 841 aa20.61■□□□□ 0.89
CHD3-204ENST00000439235 GPR33Q49SQ1 333 aa20.61■□□□□ 0.89
CHD3-204ENST00000439235 TEDDM1Q5T9Z0 273 aa20.61■□□□□ 0.89
CHD3-204ENST00000439235 RFLNAQ6ZTI6 216 aa20.61■□□□□ 0.89
CHD3-204ENST00000439235 KIAA0408Q6ZU52 694 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms