RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 MFSD5Q6N075 450 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 TRPM8Q7Z2W7 1104 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 AMZ2Q86W34 360 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 SPATA5L1Q9BVQ7 753 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 MTF2Q9Y483 593 aaPredicted RBP12.07□□□□□ -0.48
NEK1-201ENST00000439128 DUSP3P51452 185 aaPredicted RBP12.07□□□□□ -0.48
NEK1-201ENST00000439128 MANFP55145 182 aaKnown RBP12.07□□□□□ -0.48
NEK1-201ENST00000439128 FAM98BQ52LJ0 330 aaKnown RBP12.07□□□□□ -0.48
NEK1-201ENST00000439128 TXNDC11Q6PKC3 985 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 ZNF852Q6ZMS4 543 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 LRRC34Q8IZ02 419 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 ZCCHC9Q8N567 271 aaKnown RBP12.07□□□□□ -0.48
NEK1-201ENST00000439128 PHC3Q8NDX5 983 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 NSMCE2Q96MF7 247 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 ROGDIQ9GZN7 287 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 SLC32A1Q9H598 525 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 BANF1O75531 89 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 CDK7P50613 346 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 ZNF132P52740 706 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 Q6ZVU0 165 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 RBM18Q96H35 190 aaKnown RBP12.07□□□□□ -0.48
NEK1-201ENST00000439128 ATG10Q9H0Y0 220 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 MINDY3Q9H8M7 445 aa12.07□□□□□ -0.48
NEK1-201ENST00000439128 KRT75O95678 551 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 IL10RBQ08334 325 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 BBS12Q6ZW61 710 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 SERPINA9Q86WD7 417 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 SMPDL3BQ92485 455 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 PPP3R2Q96LZ3 170 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 BCAS3Q9H6U6 928 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 CROTQ9UKG9 612 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 COL1A1P02452 1464 aaPredicted RBP12.06□□□□□ -0.48
NEK1-201ENST00000439128 TK2O00142 265 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 LBPP18428 481 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 L1CAMP32004 1257 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 CCR3P51677 355 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 LY6G5CQ5SRR4 150 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 FAM171BQ6P995 826 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.06□□□□□ -0.48
NEK1-201ENST00000439128 MICU2Q8IYU8 434 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 OR52L1Q8NGH7 329 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 OR4A15Q8NGL6 344 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 ACTRT2Q8TDY3 377 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 KLC4Q9NSK0 619 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 CNTN3Q9P232 1028 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 ANGPT4Q9Y264 503 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 TOP3BO95985 862 aaKnown RBP12.06□□□□□ -0.48
NEK1-201ENST00000439128 CCNYL3P0C7X3 344 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 HAPLN1P10915 354 aaPredicted RBP12.06□□□□□ -0.48
NEK1-201ENST00000439128 PKMP14618 531 aaKnown RBP12.06□□□□□ -0.48
NEK1-201ENST00000439128 IL12BP29460 328 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 PGDP52209 483 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 PIK3R6Q5UE93 754 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 TRIM40Q6P9F5 258 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 BRSK1Q8TDC3 778 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 STYXQ8WUJ0 223 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 NCSTNQ92542 709 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 NELL1Q92832 810 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 CYP2S1Q96SQ9 504 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 SUV39H2Q9H5I1 410 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 DNAJC11Q9NVH1 559 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 VWA7Q9Y334 891 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 INTS11Q5TA45 600 aaKnown RBP12.06□□□□□ -0.48
NEK1-201ENST00000439128 CLEC20AQ6ZU45 233 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 SRFBP1Q8NEF9 429 aaKnown RBP12.06□□□□□ -0.48
NEK1-201ENST00000439128 TEPSINQ96N21 525 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 MRPS30Q9NP92 439 aaKnown RBP12.06□□□□□ -0.48
NEK1-201ENST00000439128 TMEM216Q9P0N5 145 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 C10orf71Q711Q0 1435 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 MTMR11A4FU01 709 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 SLC28A2O43868 658 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 RXRGP48443 463 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 SEPHS1P49903 392 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 GPR17Q13304 367 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 HECTD2Q5U5R9 776 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 CLEC4CQ8WTT0 213 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 ZNF354BQ96LW1 612 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 SEMA3GQ9NS98 782 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 FBXW11Q9UKB1 542 aa12.06□□□□□ -0.48
NEK1-201ENST00000439128 HEPACAM2A8MVW5 462 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 MRASO14807 208 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 PFDN1O60925 122 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 HNRNPA1P09651 372 aaKnown RBP eCLIP12.05□□□□□ -0.48
NEK1-201ENST00000439128 DUPD1Q68J44 220 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 CYP2U1Q7Z449 544 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 ZNF280BQ86YH2 543 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 C4orf32Q8N8J7 132 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 THAP1Q9NVV9 213 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 GALNT8Q9NY28 637 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 NALCNQ8IZF0 1738 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 MMP20O60882 483 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 ADH1BP00325 375 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 ATP5F1P24539 256 aaPredicted RBP12.05□□□□□ -0.48
NEK1-201ENST00000439128 RPP38P78345 283 aaKnown RBP12.05□□□□□ -0.48
NEK1-201ENST00000439128 SPIRE1Q08AE8 756 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 RASA2Q15283 850 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 P4HA3Q7Z4N8 544 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 TCAIMQ8N3R3 496 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 GPR174Q9BXC1 333 aa12.05□□□□□ -0.48
NEK1-201ENST00000439128 RCOR3Q9P2K3 495 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms