RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 LINC01553A4QN01 128 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 A6NCN8 305 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 IFNL4K9M1U5 179 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 VILLO15195 856 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 SMAD6O43541 496 aaKnown RBP3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 HS6ST1O60243 411 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 DOK2O60496 412 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 ACAA1P09110 424 aaPredicted RBP3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 G6PDP11413 515 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 FCGR1AP12314 374 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 PSMB10P40306 273 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 HTR6P50406 440 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 SEC61BP60468 96 aaKnown RBP3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 TUBA1BP68363 451 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 MRPS34P82930 218 aaKnown RBP3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 FOXM1Q08050 763 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 EFNB3Q15768 340 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 PCGF3Q3KNV8 242 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 ATP13A5Q4VNC0 1218 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 XKR9Q5GH70 373 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 FAM69BQ5VUD6 431 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 JADE1Q6IE81 842 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 ZNF517Q6ZMY9 492 aaPredicted RBP3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 SEPT14Q6ZU15 432 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 DPPA4Q7L190 304 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 FASTKD5Q7L8L6 764 aaKnown RBP3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 CCDC13Q8IYE1 715 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 DNAAF4Q8WXU2 420 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 IGSF8Q969P0 613 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 RTP4Q96DX8 246 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 BARD1Q99728 777 aaKnown RBP3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 HAUS8Q9BT25 410 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 FTOQ9C0B1 505 aaKnown RBP eCLIP3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 MAGIXQ9H6Y5 334 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 SLC28A3Q9HAS3 691 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 HAUS2Q9NVX0 235 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 NSMCE4AQ9NXX6 385 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 MAP3K20Q9NYL2 800 aaKnown RBP3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 SMARCAL1Q9NZC9 954 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 SLC9A2Q9UBY0 812 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 ACSL5Q9ULC5 683 aa3.8□□□□□ -1.8
LSM1P1-201ENST00000438629 IGLV5-37A0A075B6J1 123 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 A8MZ25 164 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 VCYO14598 125 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 SPINT2O43291 252 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 PLRG1O43660 514 aaKnown RBP3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 NDUFS7O75251 213 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 FTCDO95954 541 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 CYC1P08574 325 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 TM4SF1P30408 202 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 BDKRB2P30411 391 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 MAPK4P31152 587 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 HOXA11P31270 313 aaPredicted RBP3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 EIF2S3P41091 472 aaKnown RBP3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 COMPP49747 757 aaPredicted RBP3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 CLCNKAP51800 687 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 GALCP54803 685 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 CDH8P55286 799 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 HNRNPH2P55795 449 aaKnown RBP3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 ZXDBP98169 803 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 ACSM2AQ08AH3 577 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 OASLQ15646 514 aaKnown RBP3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 PLEKHS1Q5SXH7 462 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 DCST1Q5T197 706 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 GKAP1Q5VSY0 366 aaPredicted RBP3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 FRG2Q64ET8 278 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 ACSM2BQ68CK6 577 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 SLC36A4Q6YBV0 504 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 CHST9Q7L1S5 443 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 EPHX4Q8IUS5 362 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 SPATA2LQ8IUW3 424 aaPredicted RBP3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 WDTC1Q8N5D0 677 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 GPATCH11Q8N954 259 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 NEUROG1Q92886 237 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 MED30Q96HR3 178 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 ZNF479Q96JC4 524 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 ZNF385AQ96PM9 386 aaKnown RBP3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 DUX5Q96PT3 197 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 MAK16Q9BXY0 300 aaKnown RBP3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 TMEM39BQ9GZU3 492 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 CCDC68Q9H2F9 335 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 GHITMQ9H3K2 345 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 ACSS1Q9NUB1 689 aaPredicted RBP3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 MCM9Q9NXL9 1143 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 COPG2Q9UBF2 871 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 OR14J1Q9UGF5 321 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 VPS28Q9UK41 221 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 FBXW11Q9UKB1 542 aa3.79□□□□□ -1.8
LSM1P1-201ENST00000438629 EVPLQ92817 2033 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 ZNF644Q9H582 1327 aaPredicted RBP3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 KANSL1LA0AUZ9 987 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 CDRT15L2A8MXV6 281 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 K7ENM7 598 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 SOCS6O14544 535 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 KCNAB3O43448 404 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 RFPL2O75678 378 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 OR2C1O95371 312 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 CLTBP09497 229 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 MCM3P25205 808 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 SSTR2P30874 369 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms