RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ACMSDQ8TDX5 336 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 HDAC7Q8WUI4 952 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 GLMPQ8WWB7 406 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 ANKRD7Q92527 254 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 KAT2AQ92830 837 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 TMEM186Q96B77 213 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 LRRC45Q96CN5 670 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 PRR11Q96HE9 360 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 PGAM5Q96HS1 289 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 FBXL20Q96IG2 436 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 ARL5BQ96KC2 179 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 USP28Q96RU2 1077 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 GAD1Q99259 594 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 PKP2Q99959 881 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 FERMT1Q9BQL6 677 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 SRSF8Q9BRL6 282 aaKnown RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 MECRQ9BV79 373 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 TLR10Q9BXR5 811 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 IMPG2Q9BZV3 1241 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 ZNF350Q9GZX5 532 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 RAB33BQ9H082 229 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 MTG2Q9H4K7 406 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 TFB2MQ9H5Q4 396 aaKnown RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 HAUS4Q9H6D7 363 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 MANSC1Q9H8J5 431 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 ZBTB26Q9HCK0 441 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 GPR108Q9NPR9 543 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 PRMT8Q9NR22 394 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 FAM212BQ9NTI7 297 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 SPATA7Q9P0W8 599 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 RNF7Q9UBF6 113 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 DNAJB11Q9UBS4 358 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 FBXL17Q9UF56 701 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 AMACRQ9UHK6 382 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 NENFQ9UMX5 172 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 C15orf41Q9Y2V0 281 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 TDRKHQ9Y2W6 561 aaKnown RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 STRAPQ9Y3F4 350 aaKnown RBP3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 GMEB1Q9Y692 573 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 MYO3BQ8WXR4 1341 aa3.67□□□□□ -1.82
HMGB1P12-201ENST00000438594 DHX29Q7Z478 1369 aaKnown RBP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 PNMA6EA0A0J9YXQ4 647 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 HTR3EA5X5Y0 456 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 FAM47DPA6NHR8 397 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 UNC119BA6NIH7 251 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 KDM4EB2RXH2 506 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 CCDC188H7C350 402 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 RNASET2O00584 256 aaKnown RBP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 E2F3O00716 465 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 DNALI1O14645 258 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 CIDEAO60543 219 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 OPHN1O60890 802 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 DNAJB5O75953 348 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 MT-ATP6P00846 226 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 VIPP01282 170 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 KRT6BP04259 564 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 KRT8P05787 483 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 WEE2P0C1S8 567 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 CCDC192P0DO97 292 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 TROVE2P10155 538 aaKnown RBP eCLIP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 RALAP11233 206 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 ZNF24P17028 368 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 TRIM21P19474 475 aaKnown RBP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 CYP2A7P20853 494 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 HNRNPA2B1P22626 353 aaKnown RBP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 PRKCHP24723 683 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 CD27P26842 260 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 PSMA5P28066 241 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 CD6P30203 668 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 CCND2P30279 289 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 SFNP31947 248 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 CA8P35219 290 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 BMI1P35226 326 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 LONP1P36776 959 aaKnown RBP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 ARL1P40616 181 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 KCNJ1P48048 391 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 KRT6CP48668 564 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 CLCN4P51793 760 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 CLCNKBP51801 687 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 UCP3P55916 312 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 TIRAPP58753 221 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 EIF3EP60228 445 aaKnown RBP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 NOMO3P69849 1222 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 SP2Q02086 613 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 GFPT1Q06210 699 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 OVGP1Q12889 678 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 GRAPQ13588 217 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 KCNAB1Q14722 419 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 PGM5Q15124 567 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 NPY5RQ15761 445 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 ASTE1Q2TB18 679 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 LETM2Q2VYF4 491 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 CCDC178Q5BJE1 867 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 MDH1BQ5I0G3 518 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 NOMO2Q5JPE7 1267 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 PLA2G4FQ68DD2 849 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 TTC19Q6DKK2 380 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 AAGABQ6PD74 315 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 GDF7Q7Z4P5 450 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 SYVN1Q86TM6 617 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms