RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 LHX3Q9UBR4 397 aa8.61□□□□□ -1.03
SCRN1-208ENST00000438497 ZNF451Q9Y4E5 1061 aa8.61□□□□□ -1.03
SCRN1-208ENST00000438497 PCDHGA9Q9Y5G4 932 aaKnown RBP8.61□□□□□ -1.03
SCRN1-208ENST00000438497 PCDHGA6Q9Y5G7 932 aa8.61□□□□□ -1.03
SCRN1-208ENST00000438497 OTOGQ6ZRI0 2925 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 FAM237AA0A1B0GTK4 181 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 KRT86O43790 486 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 DPM1O60762 260 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 KIAA0754O94854 1291 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 PLEKP08567 350 aaPredicted RBP8.6□□□□□ -1.03
SCRN1-208ENST00000438497 GM2AP17900 193 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 CASP14P31944 242 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 FLT3P36888 993 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 MAPK9P45984 424 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 GABRB2P47870 512 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 FASLGP48023 281 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 GTF2A1P52655 376 aaPredicted RBP8.6□□□□□ -1.03
SCRN1-208ENST00000438497 ATP11AP98196 1134 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 NRG1Q02297 640 aaPredicted RBP8.6□□□□□ -1.03
SCRN1-208ENST00000438497 RALGDSQ12967 914 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 CHAF1BQ13112 559 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 PNOCQ13519 176 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 DNASE1L3Q13609 305 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 ELOAQ14241 798 aaKnown RBP8.6□□□□□ -1.03
SCRN1-208ENST00000438497 ZRANB3Q5FWF4 1079 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 FAM102AQ5T9C2 384 aaPredicted RBP8.6□□□□□ -1.03
SCRN1-208ENST00000438497 GJB7Q6PEY0 223 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 SRLQ86TD4 932 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 PTCD2Q8WV60 388 aaKnown RBP8.6□□□□□ -1.03
SCRN1-208ENST00000438497 THAP4Q8WY91 577 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 SH3KBP1Q96B97 665 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 CCDC34Q96HJ3 373 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 SPATA32Q96LK8 384 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 FAM81BQ96LP2 452 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 FRMD8Q9BZ67 464 aaPredicted RBP8.6□□□□□ -1.03
SCRN1-208ENST00000438497 UNKQ9C0B0 810 aaKnown RBP8.6□□□□□ -1.03
SCRN1-208ENST00000438497 PLCB1Q9NQ66 1216 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 KCTD5Q9NXV2 234 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 RCOR3Q9P2K3 495 aaPredicted RBP8.6□□□□□ -1.03
SCRN1-208ENST00000438497 FEZ2Q9UHY8 353 aaPredicted RBP8.6□□□□□ -1.03
SCRN1-208ENST00000438497 PHTF1Q9UMS5 762 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 ENTPD4Q9Y227 616 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 PCDHGB7Q9Y5F8 929 aa8.6□□□□□ -1.03
SCRN1-208ENST00000438497 ZNF106Q9H2Y7 1883 aaKnown RBP8.6□□□□□ -1.03
SCRN1-208ENST00000438497 F8P00451 2351 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 APCP25054 2843 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 ARGFXA6NJG6 315 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 GOLGA6L6A8MZA4 724 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 RASA4BC9J798 803 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 GOLGA8SH3BPF8 625 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 GPR37O15354 613 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 RASA4O43374 803 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 LRIG2O94898 1065 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 NDUFA10O95299 355 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 MAP3K6O95382 1288 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 MT-ND3P03897 115 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 IVLP07476 585 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 NFKBIAP25963 317 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 SERPINA4P29622 427 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 SCNN1AP37088 669 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 NDST2P52849 883 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 YBEYP58557 167 aaPredicted RBP8.59□□□□□ -1.03
SCRN1-208ENST00000438497 HHEXQ03014 270 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 BCL2L1Q07817 233 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 NFATC2Q13469 925 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 IL11RAQ14626 422 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 CHRNA6Q15825 494 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.59□□□□□ -1.03
SCRN1-208ENST00000438497 MANEALQ5VSG8 457 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 PAPD7Q5XG87 772 aaKnown RBP8.59□□□□□ -1.03
SCRN1-208ENST00000438497 DENND2CQ68D51 928 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 DPPA4Q7L190 304 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 BNIPLQ7Z465 357 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 XYLT1Q86Y38 959 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 PLXDC1Q8IUK5 500 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 MCEMP1Q8IX19 187 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 RHOT1Q8IXI2 618 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 PARP9Q8IXQ6 854 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 KRT222Q8N1A0 295 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 SFRP1Q8N474 314 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 Q8NA96 180 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 TMEM35BQ8NCS4 154 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 SLC37A2Q8TED4 501 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 SEC14L1Q92503 715 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 TBC1D31Q96DN5 1066 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 DHTKD1Q96HY7 919 aaPredicted RBP8.59□□□□□ -1.03
SCRN1-208ENST00000438497 ELMO2Q96JJ3 720 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 GSDMAQ96QA5 445 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 OR6C1Q96RD1 312 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 TUBGCP5Q96RT8 1024 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 CRACR2AQ9BSW2 395 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 ING2Q9H160 280 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 ATP13A3Q9H7F0 1226 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 ASF1BQ9NVP2 202 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 UBA2Q9UBT2 640 aaPredicted RBP8.59□□□□□ -1.03
SCRN1-208ENST00000438497 ITGB1BP2Q9UKP3 347 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 TMEM98Q9Y2Y6 226 aa8.59□□□□□ -1.03
SCRN1-208ENST00000438497 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.59□□□□□ -1.03
SCRN1-208ENST00000438497 ZFHX3Q15911 3703 aa8.58□□□□□ -1.04
SCRN1-208ENST00000438497 FAM170AA1A519 330 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms