RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 BARD1Q99728 777 aaKnown RBP12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 TTYH3Q9C0H2 523 aa12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ACP6Q9NPH0 428 aa12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 LHX9Q9NQ69 397 aa12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 TRNAU1APQ9NX07 287 aaKnown RBP12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 COPG1Q9Y678 874 aaKnown RBP12.24□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 TMEM229AB2RXF0 380 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 CUTAO60888 179 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 HSF2BPO75031 334 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 TMCC1O94876 653 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 TIAF1O95411 115 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ADCY8P40145 1251 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ACTR1BP42025 376 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 NDST2P52849 883 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ACTR1AP61163 376 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 RALGDSQ12967 914 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 PDCLQ13371 301 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 NFATC2Q13469 925 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 LAMB3Q13751 1172 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 PNCKQ6P2M8 343 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 FAM183BPQ6ZVS7 135 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 RRAGAQ7L523 313 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 PPM1KQ8N3J5 372 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 WDTC1Q8N5D0 677 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 EXOC2Q96KP1 924 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 C1orf74Q96LT6 269 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 GDAP1L1Q96MZ0 367 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 CPXM1Q96SM3 734 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ZYG11BQ9C0D3 744 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 LATS2Q9NRM7 1088 aa12.23□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 A8MX80 341 aa12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 C21orf140B9A014 251 aa12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 SPAG6O75602 509 aa12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 RHOBTB3O94955 611 aa12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 GLI1P08151 1106 aa12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 MYCLP1P12525 358 aaPredicted RBP12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 PTPN4P29074 926 aa12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 FASLGP48023 281 aa12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 SEPHS1P49903 392 aa12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 GFERP55789 205 aa12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 RAD51Q06609 339 aa12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 BRMS1LQ5PSV4 323 aa12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ERAP2Q6P179 960 aa12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 CAPN12Q6ZSI9 719 aa12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 FJX1Q86VR8 437 aa12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ARHGEF19Q8IW93 802 aa12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ST6GALNAC3Q8NDV1 305 aa12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 UBE2Q2Q8WVN8 375 aa12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 FRMD8Q9BZ67 464 aaPredicted RBP12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 BRD8Q9H0E9 1235 aa12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ASNSD1Q9NWL6 643 aa12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 DNAI1Q9UI46 699 aa12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 ATP8A1Q9Y2Q0 1164 aa12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 MFHAS1Q9Y4C4 1052 aa12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 MDC1Q14676 2089 aaKnown RBP12.22□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 TSPAN11A1L157 253 aa12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 GOLGA6L3A6NEY3 463 aa12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 DAB1O75553 588 aa12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 LETM1O95202 739 aaPredicted RBP12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 IGSF6O95976 241 aa12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 EPB41P11171 864 aaKnown RBP12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 COX6B1P14854 86 aa12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 SYT1P21579 422 aa12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 SUOXP51687 545 aa12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 FAM69BQ5VUD6 431 aa12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 OLFML1Q6UWY5 402 aa12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 LIPIQ6XZB0 460 aa12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 CDH24Q86UP0 819 aa12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 CEP57L1Q8IYX8 460 aa12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 SFRP1Q8N474 314 aa12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 NT5C1BQ96P26 610 aa12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 CDK15Q96Q40 435 aa12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 NPY6RQ99463 290 aa12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 SMAD5Q99717 465 aaKnown RBP12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 TBC1D10AQ9BXI6 508 aa12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 KLC2Q9H0B6 622 aa12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 SUV39H2Q9H5I1 410 aa12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 B3GNT3Q9Y2A9 372 aa12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 DNMT3AQ9Y6K1 912 aaPredicted RBP12.21□□□□□ -0.45
SMAD9-IT1-201ENST00000437983 CXorf51AA0A1B0GTR3 108 aa12.2□□□□□ -0.46
SMAD9-IT1-201ENST00000437983 PDE2AO00408 941 aaPredicted RBP12.2□□□□□ -0.46
SMAD9-IT1-201ENST00000437983 E2F3O00716 465 aa12.2□□□□□ -0.46
SMAD9-IT1-201ENST00000437983 BUB1O43683 1085 aa12.2□□□□□ -0.46
SMAD9-IT1-201ENST00000437983 PLEKP08567 350 aaPredicted RBP12.2□□□□□ -0.46
SMAD9-IT1-201ENST00000437983 ANKRD34CP0C6C1 535 aa12.2□□□□□ -0.46
SMAD9-IT1-201ENST00000437983 BPIP17213 487 aa12.2□□□□□ -0.46
SMAD9-IT1-201ENST00000437983 GLRBP48167 497 aa12.2□□□□□ -0.46
SMAD9-IT1-201ENST00000437983 SULT1E1P49888 294 aa12.2□□□□□ -0.46
SMAD9-IT1-201ENST00000437983 HDAC4P56524 1084 aa12.2□□□□□ -0.46
SMAD9-IT1-201ENST00000437983 GEMIN4P57678 1058 aaKnown RBP12.2□□□□□ -0.46
SMAD9-IT1-201ENST00000437983 RHOAP61586 193 aa12.2□□□□□ -0.46
SMAD9-IT1-201ENST00000437983 HHEXQ03014 270 aa12.2□□□□□ -0.46
SMAD9-IT1-201ENST00000437983 ART3Q13508 389 aa12.2□□□□□ -0.46
SMAD9-IT1-201ENST00000437983 RABEP1Q15276 862 aa12.2□□□□□ -0.46
SMAD9-IT1-201ENST00000437983 PHLDB2Q86SQ0 1253 aa12.2□□□□□ -0.46
SMAD9-IT1-201ENST00000437983 SYVN1Q86TM6 617 aa12.2□□□□□ -0.46
SMAD9-IT1-201ENST00000437983 KCNMB4Q86W47 210 aa12.2□□□□□ -0.46
SMAD9-IT1-201ENST00000437983 HPS6Q86YV9 775 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms