RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 NTRK1P04629 796 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 PKNOX1P55347 436 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 BROXQ5VW32 411 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 GALNT13Q8IUC8 556 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 VPS35Q96QK1 796 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 ST6GALNAC4Q9H4F1 302 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 ZNF541Q9H0D2 1346 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 SUV39H1O43463 412 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 PEX11AO75192 247 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 CBX6O95503 412 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 FGFR3P22607 806 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 CRHR1P34998 444 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 PNLIPRP1P54315 467 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 YBEYP58557 167 aaPredicted RBP15.84■□□□□ 0.13
PTPN13-204ENST00000436978 RFX4Q33E94 735 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 GPR135Q8IZ08 494 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 AARSD1Q9BTE6 412 aaKnown RBP15.84■□□□□ 0.13
PTPN13-204ENST00000436978 FBXO5Q9UKT4 447 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 SLC45A1Q9Y2W3 748 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 ELNP15502 786 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 CLCNKBP51801 687 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 PSME3P61289 254 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 FAAH2Q6GMR7 532 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 MZT2BQ6NZ67 158 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 FAM92BQ6ZTR7 304 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 C10orf107Q8IVU9 208 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 SAMD4AQ9UPU9 718 aaKnown RBP15.84■□□□□ 0.13
PTPN13-204ENST00000436978 PAPSS1O43252 624 aaPredicted RBP15.84■□□□□ 0.13
PTPN13-204ENST00000436978 TTC27Q6P3X3 843 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 IMP3Q9NV31 184 aaKnown RBP15.84■□□□□ 0.13
PTPN13-204ENST00000436978 RAI2Q9Y5P3 530 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 GMPPBQ9Y5P6 360 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 PCCBP05166 539 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 TGFBR2P37173 567 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 AUHQ13825 339 aaKnown RBP15.84■□□□□ 0.13
PTPN13-204ENST00000436978 CRTC3Q6UUV7 619 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 MOB2Q70IA6 237 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 MAGEE2Q8TD90 523 aaPredicted RBP15.84■□□□□ 0.13
PTPN13-204ENST00000436978 SMG7Q92540 1137 aaKnown RBP15.84■□□□□ 0.13
PTPN13-204ENST00000436978 CSPG4P5Q96PW8 444 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 KIF13AQ9H1H9 1805 aa15.84■□□□□ 0.13
PTPN13-204ENST00000436978 NID2Q14112 1375 aa15.83■□□□□ 0.13
PTPN13-204ENST00000436978 FAM237BA0A1B0GVD1 139 aa15.83■□□□□ 0.13
PTPN13-204ENST00000436978 A0A1B0GVM2 712 aa15.83■□□□□ 0.13
PTPN13-204ENST00000436978 TCAF2A6NFQ2 919 aa15.83■□□□□ 0.13
PTPN13-204ENST00000436978 CTBP1Q13363 440 aa15.83■□□□□ 0.13
PTPN13-204ENST00000436978 PIK3C3Q8NEB9 887 aa15.83■□□□□ 0.13
PTPN13-204ENST00000436978 NUDT4Q9NZJ9 180 aa15.83■□□□□ 0.13
PTPN13-204ENST00000436978 TGFB1I1O43294 461 aa15.83■□□□□ 0.13
PTPN13-204ENST00000436978 UGT2B17O75795 530 aa15.83■□□□□ 0.13
PTPN13-204ENST00000436978 PSMD4P55036 377 aaKnown RBP15.83■□□□□ 0.13
PTPN13-204ENST00000436978 SF1Q15637 639 aaKnown RBP15.83■□□□□ 0.13
PTPN13-204ENST00000436978 SLC26A9Q7LBE3 791 aa15.83■□□□□ 0.13
PTPN13-204ENST00000436978 HOPXQ9BPY8 73 aaPredicted RBP15.83■□□□□ 0.13
PTPN13-204ENST00000436978 LRRC72A6NJI9 287 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 MSI1O43347 362 aaKnown RBP15.83■□□□□ 0.12
PTPN13-204ENST00000436978 NDST3O95803 873 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 TAS2R40P59535 323 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 ZCCHC7Q8N3Z6 543 aaKnown RBP15.83■□□□□ 0.12
PTPN13-204ENST00000436978 DNAJB14Q8TBM8 379 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 PYDC1Q8WXC3 89 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 TRPS1Q9UHF7 1281 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 MAGEL2Q9UJ55 1249 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 NT5C1B-RDH14C9J2C7 533 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 TACR2P21452 398 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 BRCC3P46736 316 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 HSDL1Q3SXM5 330 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 RHBDF2Q6PJF5 856 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 CROCCP3Q8IVE0 287 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 SRFBP1Q8NEF9 429 aaKnown RBP15.83■□□□□ 0.12
PTPN13-204ENST00000436978 RIT1Q92963 219 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 CITO14578 2027 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 RALGDSQ12967 914 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 MPP4Q96JB8 637 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 RTKNQ9BST9 563 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 MAGEH1Q9H213 219 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 DOT1LQ8TEK3 1739 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 FSCN2O14926 492 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 LGR5O75473 907 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 PSRC1Q6PGN9 363 aaPredicted RBP15.83■□□□□ 0.12
PTPN13-204ENST00000436978 YTHDF3Q7Z739 585 aaKnown RBP15.83■□□□□ 0.12
PTPN13-204ENST00000436978 KIFC1Q9BW19 673 aa15.83■□□□□ 0.12
PTPN13-204ENST00000436978 MFN2O95140 757 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 CST1P01037 141 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 SPATA31D3P0C874 917 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 NOMO1Q15155 1222 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 SPATA31D4Q6ZUB0 917 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 TMC8Q8IU68 726 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 KCNN2Q9H2S1 579 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 DAPK2Q9UIK4 370 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 POLR3HQ9Y535 204 aaPredicted RBP15.82■□□□□ 0.12
PTPN13-204ENST00000436978 SETD1AO15047 1707 aaKnown RBP15.82■□□□□ 0.12
PTPN13-204ENST00000436978 BUD23O43709 281 aaKnown RBP15.82■□□□□ 0.12
PTPN13-204ENST00000436978 KDM3BQ7LBC6 1761 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 ALOX15BO15296 676 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 PTPN2P17706 415 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 CMPK1P30085 196 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 IDH2P48735 452 aaKnown RBP15.82■□□□□ 0.12
PTPN13-204ENST00000436978 ACTR3P61158 418 aa15.82■□□□□ 0.12
PTPN13-204ENST00000436978 PLA2G4EQ3MJ16 856 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms