RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 WIPI1Q5MNZ9 446 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 EOGTQ5NDL2 527 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 EMC10Q5UCC4 262 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 FSTL4Q6MZW2 842 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 CXorf57Q6NSI4 855 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 TIGD7Q6NT04 549 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 MFSD7Q6UXD7 560 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 SERPINA13PQ6UXR4 307 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 TBC1D21Q8IYX1 336 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 APCDD1Q8J025 514 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 UMODL1-AS1Q8N2C9 162 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 BBS5Q8N3I7 341 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 SYNPOQ8N3V7 929 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 ATPAF2Q8N5M1 289 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 PJA1Q8NG27 643 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 OR7D4Q8NG98 312 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 OR52K2Q8NGK3 314 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 PCDH19Q8TAB3 1148 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 FAM71BQ8TC56 605 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 WFDC5Q8TCV5 224 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 CCHCR1Q8TD31 782 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 MAIP1Q8WWC4 291 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 P3H4Q92791 437 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 GAL3ST3Q96A11 431 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 FAF2Q96CS3 445 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 HMCESQ96FZ2 354 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 HES6Q96HZ4 224 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 CELF6Q96J87 481 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 PBKQ96KB5 322 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 PSMB7Q99436 277 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 NAPGQ99747 312 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 NUDT16L1Q9BRJ7 211 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 FEM1AQ9BSK4 669 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 HEMGNQ9BXL5 484 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 TRIM55Q9BYV6 548 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 OSBPL8Q9BZF1 889 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 OSBPL6Q9BZF3 934 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 FOXQ1Q9C009 403 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 SLC39A8Q9C0K1 460 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 MRPL46Q9H2W6 279 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 SP110Q9HB58 689 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 KCND1Q9NSA2 647 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 ELOVL2Q9NXB9 296 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 IL1RAPL1Q9NZN1 696 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 ZC3H7BQ9UGR2 993 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 EFR3BQ9Y2G0 817 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 CARD8Q9Y2G2 431 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 SIT1Q9Y3P8 196 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 PCDHGB7Q9Y5F8 929 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 HEY1Q9Y5J3 304 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 RAD54BQ9Y620 910 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 TICRRQ7Z2Z1 1910 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 MYO10Q9HD67 2058 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 CHD7Q9P2D1 2997 aa6.24□□□□□ -1.41
ECHDC1-208ENST00000436638 LAMA3Q16787 3333 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 hCG_1818297A0A087WSY0 165 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 A0A0D9SEW6 157 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 H7C0C1 242 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 K7EQS6 105 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 KDELR3O43731 214 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 ZBTB14O43829 449 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 MFSD11O43934 449 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 SYNCRIPO60506 623 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 ZNF189O75820 626 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 KLF8O95600 359 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 TUBB4AP04350 444 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 DLDP09622 509 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 PYGMP11217 842 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 CHRNB1P11230 501 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 PECAM1P16284 738 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 TCP1P17987 556 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 NTF4P34130 210 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 PTPN7P35236 360 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 ACVRL1P37023 503 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 WASP42768 502 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 ATP5OP48047 213 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 NR2C2P49116 596 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 NUMBP49757 651 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 ETF1P62495 437 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 RELQ04864 619 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 ZNF234Q14588 700 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 STARD3Q14849 445 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 PDK1Q15118 436 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 LONRF2Q1L5Z9 754 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 MSMPQ1L6U9 139 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 KRT71Q3SY84 523 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 ANKDD1AQ495B1 522 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 C2orf27AQ580R0 203 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 NCBP2-AS2Q69YL0 99 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 UBE3DQ7Z6J8 389 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 ADIPOR2Q86V24 386 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 C17orf53Q8N3J3 647 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 RYBPQ8N488 228 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 CCDC33Q8N5R6 958 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 CCNYQ8ND76 341 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 RPLP0P6Q8NHW5 317 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 CCDC110Q8TBZ0 833 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 CYB5D2Q8WUJ1 264 aa6.23□□□□□ -1.41
ECHDC1-208ENST00000436638 CASKIN2Q8WXE0 1202 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms