RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 KIF3CO14782 793 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 DNAJA2O60884 412 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 SOAT2O75908 522 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 CDK14O94921 469 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 TNFAIP8O95379 198 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 MATN4O95460 622 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 RHOCP08134 193 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 GFAPP14136 432 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 ELNP15502 786 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 SELPP16109 830 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 HOXD10P28358 340 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 SLC7A1P30825 629 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 KCNC1P48547 511 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 SLC11A1P49279 550 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 MRPL19P49406 292 aaKnown RBP10.4□□□□□ -0.75
CD44-210ENST00000434472 TIAL1Q01085 375 aaKnown RBP eCLIP10.4□□□□□ -0.75
CD44-210ENST00000434472 ROR2Q01974 943 aaKnown RBP10.4□□□□□ -0.75
CD44-210ENST00000434472 FOXM1Q08050 763 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 GRIK2Q13002 908 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 SEMA3AQ14563 771 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 OR4D1Q15615 310 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 ADRM1Q16186 407 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 PPP1R3AQ16821 1122 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 GEN1Q17RS7 908 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 KIF19Q2TAC6 998 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 PABPC1LQ4VXU2 614 aaKnown RBP10.4□□□□□ -0.75
CD44-210ENST00000434472 COQ5Q5HYK3 327 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 FOXB2Q5VYV0 432 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 ANKS6Q68DC2 871 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 CLEC6AQ6EIG7 209 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 KLHDC10Q6PID8 442 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 LRRC8DQ7L1W4 858 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 ARPINQ7Z6K5 226 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 FBXO39Q8N4B4 442 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 RNF148Q8N7C7 305 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 TMEM102Q8N9M5 508 aaPredicted RBP10.4□□□□□ -0.75
CD44-210ENST00000434472 GOLM1Q8NBJ4 401 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 PHC3Q8NDX5 983 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 TWIST2Q8WVJ9 160 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 EXT2Q93063 718 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 ZUFSPQ96AP4 578 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 KLHL32Q96NJ5 620 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 CASD1Q96PB1 797 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 AKTIPQ9H8T0 292 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 VCX3AQ9NNX9 186 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 SCUBE2Q9NQ36 999 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 POLR3BQ9NW08 1133 aaPredicted RBP10.4□□□□□ -0.75
CD44-210ENST00000434472 MARCH5Q9NX47 278 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 AP4B1Q9Y6B7 739 aa10.4□□□□□ -0.75
CD44-210ENST00000434472 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.39□□□□□ -0.75
CD44-210ENST00000434472 UBA6A0AVT1 1052 aaPredicted RBP10.39□□□□□ -0.75
CD44-210ENST00000434472 GOLGA8CPA6NN73 597 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 ENO4A6NNW6 628 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 SUPT3HB4E1H0 165 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 UBXN8O00124 270 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 VPS26AO75436 327 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 SUPT3HO75486 399 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 CRCPO75575 148 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 PABPC4LP0CB38 370 aaKnown RBP10.39□□□□□ -0.75
CD44-210ENST00000434472 IDO1P14902 403 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 LPOP22079 712 aaPredicted RBP10.39□□□□□ -0.75
CD44-210ENST00000434472 TUFMP49411 452 aaKnown RBP10.39□□□□□ -0.75
CD44-210ENST00000434472 KCNQ1P51787 676 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 SH3BP2P78314 561 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 BNIP2Q12982 314 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 LCP2Q13094 533 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 DUSP4Q13115 394 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 ZNF177Q13360 481 aaPredicted RBP10.39□□□□□ -0.75
CD44-210ENST00000434472 BFSP2Q13515 415 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 RPS6KA2Q15349 733 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 TLR1Q15399 786 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 AARS2Q5JTZ9 985 aaKnown RBP10.39□□□□□ -0.75
CD44-210ENST00000434472 CWF19L1Q69YN2 538 aaKnown RBP10.39□□□□□ -0.75
CD44-210ENST00000434472 FBXL19Q6PCT2 694 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 RPS27LQ71UM5 84 aaKnown RBP10.39□□□□□ -0.75
CD44-210ENST00000434472 GLT6D1Q7Z4J2 308 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 DHFR2Q86XF0 187 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 LILRA2Q8N149 483 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 OR7D4Q8NG98 312 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 GIPC2Q8TF65 315 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 DDI1Q8WTU0 396 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 SEPT8Q92599 483 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 RMDN1Q96DB5 314 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 ZFRQ96KR1 1074 aaKnown RBP10.39□□□□□ -0.75
CD44-210ENST00000434472 UHRF1Q96T88 793 aaPredicted RBP10.39□□□□□ -0.75
CD44-210ENST00000434472 CCT7Q99832 543 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 TTPALQ9BTX7 342 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 SPON2Q9BUD6 331 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 SPATA16Q9BXB7 569 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 C1QTNF3Q9BXJ4 246 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 MRPS26Q9BYN8 205 aaKnown RBP10.39□□□□□ -0.75
CD44-210ENST00000434472 TRIM4Q9C037 500 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 NACA2Q9H009 215 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 ZNF696Q9H7X3 374 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 NMRK2Q9NPI5 230 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 TMEM45AQ9NWC5 275 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 PADI4Q9UM07 663 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 DNAJC15Q9Y5T4 150 aa10.39□□□□□ -0.75
CD44-210ENST00000434472 ZFP37Q9Y6Q3 630 aaPredicted RBP10.39□□□□□ -0.75
CD44-210ENST00000434472 THSD7BQ9C0I4 1608 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms