RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 H0Y3Z8 333 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 CKMP06732 381 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 MBL2P11226 248 aaPredicted RBP11.92□□□□□ -0.5
CTCFL-209ENST00000433949 PTPN2P17706 415 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 PPARGP37231 505 aaPredicted RBP11.92□□□□□ -0.5
CTCFL-209ENST00000433949 ZNF140P52738 457 aaPredicted RBP11.92□□□□□ -0.5
CTCFL-209ENST00000433949 ADGRE1Q14246 886 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 LSM12Q3MHD2 195 aaKnown RBP11.92□□□□□ -0.5
CTCFL-209ENST00000433949 ACCSLQ4AC99 568 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 SPATA6LQ8N4H0 392 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 KDM1BQ8NB78 822 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 RP9Q8TA86 221 aaKnown RBP11.92□□□□□ -0.5
CTCFL-209ENST00000433949 RHEBL1Q8TAI7 183 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 WDR60Q8WVS4 1066 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 SMG7Q92540 1137 aaKnown RBP11.92□□□□□ -0.5
CTCFL-209ENST00000433949 MRPS31Q92665 395 aaKnown RBP11.92□□□□□ -0.5
CTCFL-209ENST00000433949 USP13Q92995 863 aaPredicted RBP11.92□□□□□ -0.5
CTCFL-209ENST00000433949 MAELQ96JY0 434 aaKnown RBP11.92□□□□□ -0.5
CTCFL-209ENST00000433949 OR52B2Q96RD2 323 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 NUF2Q9BZD4 464 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 NSUN3Q9H649 340 aaKnown RBP11.92□□□□□ -0.5
CTCFL-209ENST00000433949 SYTL2Q9HCH5 934 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 HACD3Q9P035 362 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 SLC7A8Q9UHI5 535 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 CRYL1Q9Y2S2 319 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 KCTD3Q9Y597 815 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 RGSL1A5PLK6 1076 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 ZBTB14O43829 449 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 XYLBO75191 536 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 GJB3O75712 270 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 IMPDH1P20839 514 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 PTDSS1P48651 473 aaKnown RBP11.92□□□□□ -0.5
CTCFL-209ENST00000433949 CDKN2DP55273 166 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 RCN1Q15293 331 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 TEAD2Q15562 447 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 C1orf146Q5VVC0 180 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 RNF219Q5W0B1 726 aaPredicted RBP11.92□□□□□ -0.5
CTCFL-209ENST00000433949 CXorf57Q6NSI4 855 aaKnown RBP11.92□□□□□ -0.5
CTCFL-209ENST00000433949 RNF135Q8IUD6 432 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 PHTF2Q8N3S3 785 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 HJURPQ8NCD3 748 aaPredicted RBP11.92□□□□□ -0.5
CTCFL-209ENST00000433949 OR13C4Q8NGS5 318 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 CEP70Q8NHQ1 597 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 PPP2R3CQ969Q6 453 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 ZNF707Q96C28 371 aaPredicted RBP11.92□□□□□ -0.5
CTCFL-209ENST00000433949 L3HYPDHQ96EM0 354 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 GCNAQ96QF7 691 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 CCDC68Q9H2F9 335 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 NDE1Q9NXR1 346 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 LRRC42Q9Y546 428 aa11.92□□□□□ -0.5
CTCFL-209ENST00000433949 A0A088AWK7 358 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 OR51F1A6NGY5 319 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 ANKRD66B4E2M5 251 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 H0Y626 953 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 CCNT2O60583 730 aaKnown RBP11.91□□□□□ -0.5
CTCFL-209ENST00000433949 SMIM24O75264 130 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 FKBP6O75344 327 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 ZNF37AP17032 561 aaPredicted RBP11.91□□□□□ -0.5
CTCFL-209ENST00000433949 LPOP22079 712 aaPredicted RBP11.91□□□□□ -0.5
CTCFL-209ENST00000433949 EPHA3P29320 983 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 NAA20P61599 178 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 ZXDBP98169 803 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 BTKQ06187 659 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 SLC34A1Q06495 639 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 DLX2Q07687 328 aaPredicted RBP11.91□□□□□ -0.5
CTCFL-209ENST00000433949 HERC3Q15034 1050 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 CYTH1Q15438 398 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 CMPK2Q5EBM0 449 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 GPR158Q5T848 1215 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 FRMD7Q6ZUT3 714 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 ISCA2Q86U28 154 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 POU5F2Q8N7G0 328 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 GIMAP7Q8NHV1 300 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 SHKBP1Q8TBC3 707 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 WBP2Q969T9 261 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 SGF29Q96ES7 293 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 AARSD1Q9BTE6 412 aaKnown RBP11.91□□□□□ -0.5
CTCFL-209ENST00000433949 SLC46A2Q9BY10 475 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 SUDS3Q9H7L9 328 aaPredicted RBP11.91□□□□□ -0.5
CTCFL-209ENST00000433949 DPP7Q9UHL4 492 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 ANGPTL2Q9UKU9 493 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 CCDC189A1A4V9 331 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 CCL22O00626 93 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 OLFM2O95897 454 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 SP100P23497 879 aaPredicted RBP11.91□□□□□ -0.5
CTCFL-209ENST00000433949 VHLP40337 213 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 RGRP47804 291 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 AP2B1P63010 937 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 SLC25A3Q00325 362 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 PDAP1Q13442 181 aaKnown RBP11.91□□□□□ -0.5
CTCFL-209ENST00000433949 CCDC85BQ15834 202 aaPredicted RBP11.91□□□□□ -0.5
CTCFL-209ENST00000433949 AAGABQ6PD74 315 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 RIPOR1Q6ZS17 1223 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 Q7L0L9 218 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 LDB1Q86U70 411 aaPredicted RBP11.91□□□□□ -0.5
CTCFL-209ENST00000433949 MFN1Q8IWA4 741 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 ITFG1Q8TB96 612 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 ANKRD49Q8WVL7 239 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 JADE3Q92613 823 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 LENG8Q96PV6 779 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms