RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 PRLP01236 227 aa17.52■□□□□ 0.4
NUP50-208ENST00000430547 MPOP05164 745 aa17.52■□□□□ 0.4
NUP50-208ENST00000430547 CEACAM5P06731 702 aa17.52■□□□□ 0.4
NUP50-208ENST00000430547 MMP2P08253 660 aa17.52■□□□□ 0.4
NUP50-208ENST00000430547 GABREP78334 506 aa17.52■□□□□ 0.4
NUP50-208ENST00000430547 PEX6Q13608 980 aa17.52■□□□□ 0.4
NUP50-208ENST00000430547 LLGL1Q15334 1064 aa17.52■□□□□ 0.4
NUP50-208ENST00000430547 ADAMTSL4Q6UY14 1074 aa17.52■□□□□ 0.4
NUP50-208ENST00000430547 LRRC69Q6ZNQ3 347 aa17.52■□□□□ 0.4
NUP50-208ENST00000430547 RAVER1Q8IY67 606 aaKnown RBP17.52■□□□□ 0.4
NUP50-208ENST00000430547 KATNAL2Q8IYT4 538 aa17.52■□□□□ 0.4
NUP50-208ENST00000430547 RCOR2Q8IZ40 523 aa17.52■□□□□ 0.4
NUP50-208ENST00000430547 LSMEM2Q8N112 164 aa17.52■□□□□ 0.4
NUP50-208ENST00000430547 EXD1Q8NHP7 514 aa17.52■□□□□ 0.4
NUP50-208ENST00000430547 TFB1MQ8WVM0 346 aaKnown RBP17.52■□□□□ 0.4
NUP50-208ENST00000430547 HNRNPLLQ8WVV9 542 aaKnown RBP17.52■□□□□ 0.4
NUP50-208ENST00000430547 P3H4Q92791 437 aa17.52■□□□□ 0.4
NUP50-208ENST00000430547 SCAMP4Q969E2 229 aa17.52■□□□□ 0.4
NUP50-208ENST00000430547 CALR3Q96L12 384 aaKnown RBP17.52■□□□□ 0.4
NUP50-208ENST00000430547 LYSMD1Q96S90 227 aa17.52■□□□□ 0.4
NUP50-208ENST00000430547 CDH19Q9H159 772 aa17.52■□□□□ 0.4
NUP50-208ENST00000430547 SLC25A51Q9H1U9 297 aa17.52■□□□□ 0.4
NUP50-208ENST00000430547 TRNAU1APQ9NX07 287 aaKnown RBP17.52■□□□□ 0.4
NUP50-208ENST00000430547 SUFUQ9UMX1 484 aa17.52■□□□□ 0.4
NUP50-208ENST00000430547 EPN1Q9Y6I3 576 aaPredicted RBP17.52■□□□□ 0.4
NUP50-208ENST00000430547 UNC13CQ8NB66 2214 aa17.51■□□□□ 0.39
NUP50-208ENST00000430547 TNNT3P45378 269 aaPredicted RBP17.51■□□□□ 0.39
NUP50-208ENST00000430547 BIRC2Q13490 618 aa17.51■□□□□ 0.39
NUP50-208ENST00000430547 GALNT3Q14435 633 aa17.51■□□□□ 0.39
NUP50-208ENST00000430547 PCSK7Q16549 785 aa17.51■□□□□ 0.39
NUP50-208ENST00000430547 QPCTQ16769 361 aa17.51■□□□□ 0.39
NUP50-208ENST00000430547 C3orf38Q5JPI3 329 aa17.51■□□□□ 0.39
NUP50-208ENST00000430547 CCDC70Q6NSX1 233 aa17.51■□□□□ 0.39
NUP50-208ENST00000430547 RFLNAQ6ZTI6 216 aa17.51■□□□□ 0.39
NUP50-208ENST00000430547 B4GALNT4Q76KP1 1039 aa17.51■□□□□ 0.39
NUP50-208ENST00000430547 KDELC2Q7Z4H8 507 aa17.51■□□□□ 0.39
NUP50-208ENST00000430547 NLRP8Q86W28 1048 aa17.51■□□□□ 0.39
NUP50-208ENST00000430547 GPR156Q8NFN8 814 aa17.51■□□□□ 0.39
NUP50-208ENST00000430547 CCL4L1Q8NHW4 92 aa17.51■□□□□ 0.39
NUP50-208ENST00000430547 FGF11Q92914 225 aa17.51■□□□□ 0.39
NUP50-208ENST00000430547 IMP4Q96G21 291 aaKnown RBP17.51■□□□□ 0.39
NUP50-208ENST00000430547 HIC2Q96JB3 615 aa17.51■□□□□ 0.39
NUP50-208ENST00000430547 GFM1Q96RP9 751 aaKnown RBP17.51■□□□□ 0.39
NUP50-208ENST00000430547 RIOK2Q9BVS4 552 aaKnown RBP17.51■□□□□ 0.39
NUP50-208ENST00000430547 POLR1BQ9H9Y6 1135 aa17.51■□□□□ 0.39
NUP50-208ENST00000430547 SAE1Q9UBE0 346 aaPredicted RBP17.51■□□□□ 0.39
NUP50-208ENST00000430547 SLC17A4Q9Y2C5 497 aa17.51■□□□□ 0.39
NUP50-208ENST00000430547 KIF26BQ2KJY2 2108 aa17.51■□□□□ 0.39
NUP50-208ENST00000430547 A0A087WV48 116 aa17.5■□□□□ 0.39
NUP50-208ENST00000430547 MTSS1O43312 755 aa17.5■□□□□ 0.39
NUP50-208ENST00000430547 ASMTLO95671 621 aa17.5■□□□□ 0.39
NUP50-208ENST00000430547 IVLP07476 585 aa17.5■□□□□ 0.39
NUP50-208ENST00000430547 GLB1P16278 677 aa17.5■□□□□ 0.39
NUP50-208ENST00000430547 PECAM1P16284 738 aaPredicted RBP17.5■□□□□ 0.39
NUP50-208ENST00000430547 ABCG1P45844 678 aa17.5■□□□□ 0.39
NUP50-208ENST00000430547 POLD2P49005 469 aa17.5■□□□□ 0.39
NUP50-208ENST00000430547 PRKD1Q15139 912 aaPredicted RBP17.5■□□□□ 0.39
NUP50-208ENST00000430547 TAZQ16635 292 aa17.5■□□□□ 0.39
NUP50-208ENST00000430547 COL28A1Q2UY09 1125 aa17.5■□□□□ 0.39
NUP50-208ENST00000430547 TBC1D25Q3MII6 688 aa17.5■□□□□ 0.39
NUP50-208ENST00000430547 C14orf28Q4W4Y0 310 aa17.5■□□□□ 0.39
NUP50-208ENST00000430547 TEX44Q53QW1 395 aa17.5■□□□□ 0.39
NUP50-208ENST00000430547 CCDC181Q5TID7 509 aa17.5■□□□□ 0.39
NUP50-208ENST00000430547 ZC3H18Q86VM9 953 aaKnown RBP17.5■□□□□ 0.39
NUP50-208ENST00000430547 GPBAR1Q8TDU6 330 aa17.5■□□□□ 0.39
NUP50-208ENST00000430547 HAUS1Q96CS2 278 aa17.5■□□□□ 0.39
NUP50-208ENST00000430547 ATXN7L3BQ96GX2 97 aa17.5■□□□□ 0.39
NUP50-208ENST00000430547 OR2M4Q96R27 311 aa17.5■□□□□ 0.39
NUP50-208ENST00000430547 GLOD4Q9HC38 313 aa17.5■□□□□ 0.39
NUP50-208ENST00000430547 hCG_1818297A0A087WSY0 165 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 INPP4BO15327 924 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 TLX3O43711 291 aaPredicted RBP17.49■□□□□ 0.39
NUP50-208ENST00000430547 SOD1P00441 154 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 SLC4A1P02730 911 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 RPLP0P05388 317 aaKnown RBP17.49■□□□□ 0.39
NUP50-208ENST00000430547 LSSP48449 732 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 MARCKSL1P49006 195 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 SPINT3P49223 89 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 CDK18Q07002 472 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 SLC14A2Q15849 920 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 CERCAMQ5T4B2 595 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 OGFOD3Q6PK18 319 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 SLC30A9Q6PML9 568 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 MARK2Q7KZI7 788 aaKnown RBP17.49■□□□□ 0.39
NUP50-208ENST00000430547 LYSMD3Q7Z3D4 306 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 TRIM74Q86UV6 250 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 SNIP1Q8TAD8 396 aaKnown RBP17.49■□□□□ 0.39
NUP50-208ENST00000430547 ZDHHC1Q8WTX9 485 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 FAM83DQ9H4H8 585 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 ZFYVE1Q9HBF4 777 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 TAAR2Q9P1P5 351 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 KLHL8Q9P2G9 620 aaPredicted RBP17.49■□□□□ 0.39
NUP50-208ENST00000430547 LRIT1Q9P2V4 623 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 RABGEF1Q9UJ41 708 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 RALYQ9UKM9 306 aaKnown RBP17.49■□□□□ 0.39
NUP50-208ENST00000430547 SATB2Q9UPW6 733 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 TMEM98Q9Y2Y6 226 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 ENTPD2Q9Y5L3 495 aa17.49■□□□□ 0.39
NUP50-208ENST00000430547 SCN8AQ9UQD0 1980 aa17.48■□□□□ 0.39
NUP50-208ENST00000430547 RGSL1A5PLK6 1076 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms