RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ZNF423Q2M1K9 1284 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 SAMD4BQ5PRF9 694 aaKnown RBP8.06□□□□□ -1.12
HPS4-205ENST00000429411 PGM2L1Q6PCE3 622 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 CHRDL2Q6WN34 429 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 RALGPS2Q86X27 583 aaPredicted RBP8.06□□□□□ -1.12
HPS4-205ENST00000429411 CHPFQ8IZ52 775 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 ANKRD49Q8WVL7 239 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 FBXO32Q969P5 355 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 MRPL40Q9NQ50 206 aaKnown RBP8.06□□□□□ -1.12
HPS4-205ENST00000429411 TMLHEQ9NVH6 421 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 GALNT8Q9NY28 637 aa8.06□□□□□ -1.12
HPS4-205ENST00000429411 PRORSD1PA6NEY8 169 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 NT5C1B-RDH14C9J2C7 533 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 H3BNX3 289 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 CBX4O00257 560 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 ZNF195O14628 629 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 AKR1A1P14550 325 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 GLDCP23378 1020 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 AXLP30530 894 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 GGT5P36269 586 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 ARSDP51689 593 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 NRG1Q02297 640 aaPredicted RBP8.05□□□□□ -1.12
HPS4-205ENST00000429411 FRG1Q14331 258 aaKnown RBP8.05□□□□□ -1.12
HPS4-205ENST00000429411 KCNA10Q16322 511 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 MYLK3Q32MK0 819 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 STXBP5Q5T5C0 1151 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 FAM91A1Q658Y4 838 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 TIGD7Q6NT04 549 aaPredicted RBP8.05□□□□□ -1.12
HPS4-205ENST00000429411 MRNIPQ6NTE8 343 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 POTEHQ6S545 545 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 GPR141Q7Z602 305 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 MILR1Q7Z6M3 343 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 BBS5Q8N3I7 341 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 FBXO39Q8N4B4 442 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 CDYL2Q8N8U2 506 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 FNDC5Q8NAU1 212 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 ADCY4Q8NFM4 1077 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 ZFP28Q8NHY6 868 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 SH3KBP1Q96B97 665 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 C19orf60Q96EN9 201 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 ZNF512Q96ME7 567 aaPredicted RBP8.05□□□□□ -1.12
HPS4-205ENST00000429411 ABCG8Q9H221 673 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 PREBQ9HCU5 417 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 TBC1D13Q9NVG8 400 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 MARCH4Q9P2E8 410 aaPredicted RBP8.05□□□□□ -1.12
HPS4-205ENST00000429411 ZMYM5Q9UJ78 669 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 A0A087X1B8 175 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 ITGB1P05556 798 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 HAPLN1P10915 354 aaPredicted RBP8.05□□□□□ -1.12
HPS4-205ENST00000429411 POU4F1Q01851 419 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 SQLEQ14534 574 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 KDM1BQ8NB78 822 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 FAM81AQ8TBF8 368 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 GTF3C2Q8WUA4 911 aaPredicted RBP8.05□□□□□ -1.12
HPS4-205ENST00000429411 DLG3Q92796 817 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 SDCCAG3Q96C92 435 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 BTBD9Q96Q07 612 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 CDK15Q96Q40 435 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 ACOX2Q99424 681 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 SLC29A1Q99808 456 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 TBCDQ9BTW9 1192 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 ABCG4Q9H172 646 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 ABCC13Q9NSE7 274 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 SPATA7Q9P0W8 599 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 ACTL7AQ9Y615 435 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 DHRS12A0PJE2 317 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 MATN3O15232 486 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 ASGR1P07306 291 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 ACRP10323 421 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 FASP25445 335 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 EEF1DP29692 281 aaKnown RBP8.05□□□□□ -1.12
HPS4-205ENST00000429411 PBX3P40426 434 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 HSD17B7P56937 341 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 TLE2Q04725 743 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 SFSWAPQ12872 951 aaKnown RBP8.05□□□□□ -1.12
HPS4-205ENST00000429411 GRB14Q14449 540 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 PIGGQ5H8A4 983 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 GPR107Q5VW38 600 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 UNC80Q8N2C7 3258 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 LPCAT1Q8NF37 534 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 RDH11Q8TC12 318 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 CCDC126Q96EE4 140 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 LRCH3Q96II8 777 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 PPM1MQ96MI6 270 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 SMIM14Q96QK8 99 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 KCTD14Q9BQ13 255 aaPredicted RBP8.05□□□□□ -1.12
HPS4-205ENST00000429411 THUMPD3Q9BV44 507 aaKnown RBP8.05□□□□□ -1.12
HPS4-205ENST00000429411 KATNAL1Q9BW62 490 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 TRIM15Q9C019 465 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 PAIP1Q9H074 479 aaKnown RBP8.05□□□□□ -1.12
HPS4-205ENST00000429411 TMEM39AQ9NV64 488 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 SMPD4Q9NXE4 827 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 CACNA2D2Q9NY47 1150 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 NDUFA13Q9P0J0 144 aa8.05□□□□□ -1.12
HPS4-205ENST00000429411 TDRKHQ9Y2W6 561 aaKnown RBP8.05□□□□□ -1.12
HPS4-205ENST00000429411 TCAF2A6NFQ2 919 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 MAP4P27816 1152 aaKnown RBP8.04□□□□□ -1.12
HPS4-205ENST00000429411 SCNN1AP37088 669 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 HSPA13P48723 471 aa8.04□□□□□ -1.12
HPS4-205ENST00000429411 PGFP49763 221 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms