RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 SLC22A18ASQ8N1D0 253 aa14.51□□□□□ -0.09
SGCE-204ENST00000428696 PELI3Q8N2H9 469 aa14.51□□□□□ -0.09
SGCE-204ENST00000428696 SPATA4Q8NEY3 305 aa14.51□□□□□ -0.09
SGCE-204ENST00000428696 OR4K2Q8NGD2 314 aa14.51□□□□□ -0.09
SGCE-204ENST00000428696 FAM174AQ8TBP5 190 aa14.51□□□□□ -0.09
SGCE-204ENST00000428696 BRSK1Q8TDC3 778 aa14.51□□□□□ -0.09
SGCE-204ENST00000428696 EID2BQ96D98 161 aa14.51□□□□□ -0.09
SGCE-204ENST00000428696 AGAP2Q99490 1192 aa14.51□□□□□ -0.09
SGCE-204ENST00000428696 TRIM31Q9BZY9 425 aa14.51□□□□□ -0.09
SGCE-204ENST00000428696 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.51□□□□□ -0.09
SGCE-204ENST00000428696 CDC23Q9UJX2 597 aa14.51□□□□□ -0.09
SGCE-204ENST00000428696 KCTD3Q9Y597 815 aa14.51□□□□□ -0.09
SGCE-204ENST00000428696 RALGAPA1Q6GYQ0 2036 aa14.51□□□□□ -0.09
SGCE-204ENST00000428696 DOCK9Q9BZ29 2069 aa14.51□□□□□ -0.09
SGCE-204ENST00000428696 LAMA1P25391 3075 aa14.51□□□□□ -0.09
SGCE-204ENST00000428696 SDC3O75056 442 aa14.5□□□□□ -0.09
SGCE-204ENST00000428696 TUBB4AP04350 444 aa14.5□□□□□ -0.09
SGCE-204ENST00000428696 TSHRP16473 764 aa14.5□□□□□ -0.09
SGCE-204ENST00000428696 BPIP17213 487 aa14.5□□□□□ -0.09
SGCE-204ENST00000428696 ARRB1P49407 418 aaPredicted RBP14.5□□□□□ -0.09
SGCE-204ENST00000428696 YPEL5P62699 121 aa14.5□□□□□ -0.09
SGCE-204ENST00000428696 SARNPP82979 210 aaKnown RBP14.5□□□□□ -0.09
SGCE-204ENST00000428696 CKAP4Q07065 602 aaKnown RBP14.5□□□□□ -0.09
SGCE-204ENST00000428696 CDH17Q12864 832 aa14.5□□□□□ -0.09
SGCE-204ENST00000428696 AGERQ15109 404 aa14.5□□□□□ -0.09
SGCE-204ENST00000428696 TAF1AQ15573 450 aaPredicted RBP14.5□□□□□ -0.09
SGCE-204ENST00000428696 FAM151BQ6UXP7 276 aa14.5□□□□□ -0.09
SGCE-204ENST00000428696 HID1Q8IV36 788 aa14.5□□□□□ -0.09
SGCE-204ENST00000428696 TTC30BQ8N4P2 665 aa14.5□□□□□ -0.09
SGCE-204ENST00000428696 GPR26Q8NDV2 337 aa14.5□□□□□ -0.09
SGCE-204ENST00000428696 TSACCQ96A04 125 aaPredicted RBP14.5□□□□□ -0.09
SGCE-204ENST00000428696 FUBP1Q96AE4 644 aaKnown RBP14.5□□□□□ -0.09
SGCE-204ENST00000428696 RUNDC3BQ96NL0 473 aa14.5□□□□□ -0.09
SGCE-204ENST00000428696 ELF4Q99607 663 aaPredicted RBP14.5□□□□□ -0.09
SGCE-204ENST00000428696 LGR4Q9BXB1 951 aa14.5□□□□□ -0.09
SGCE-204ENST00000428696 CAAP1Q9H8G2 361 aa14.5□□□□□ -0.09
SGCE-204ENST00000428696 ARFGAP3Q9NP61 516 aa14.5□□□□□ -0.09
SGCE-204ENST00000428696 PHPT1Q9NRX4 125 aaPredicted RBP14.5□□□□□ -0.09
SGCE-204ENST00000428696 RAD18Q9NS91 495 aa14.5□□□□□ -0.09
SGCE-204ENST00000428696 TCRBV7S3A2A0A539 114 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 RGSL1A5PLK6 1076 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 CDX4O14627 284 aaPredicted RBP14.49□□□□□ -0.09
SGCE-204ENST00000428696 TTI1O43156 1089 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 HMGCLP35914 325 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 PTGIRP43119 386 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 DNTTIP2Q5QJE6 756 aaKnown RBP14.49□□□□□ -0.09
SGCE-204ENST00000428696 TPRG1LQ5T0D9 272 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 ESRP1Q6NXG1 681 aaKnown RBP14.49□□□□□ -0.09
SGCE-204ENST00000428696 MARK2Q7KZI7 788 aaKnown RBP14.49□□□□□ -0.09
SGCE-204ENST00000428696 TRIM74Q86UV6 250 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 GATAD2AQ86YP4 633 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 GDAP1Q8TB36 358 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 SETD7Q8WTS6 366 aaKnown RBP14.49□□□□□ -0.09
SGCE-204ENST00000428696 TRIM51Q9BSJ1 452 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 ARNT2Q9HBZ2 717 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 PLSCR2Q9NRY7 297 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 TM7SF3Q9NS93 570 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 PCYOX1Q9UHG3 505 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 CDV3Q9UKY7 258 aaKnown RBP14.49□□□□□ -0.09
SGCE-204ENST00000428696 TMEM98Q9Y2Y6 226 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 PLXNA2O75051 1894 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 FAM186AA6NE01 2351 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 SPTY2D1-AS1A0A0U1RR47 76 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 TMEM202A6NGA9 273 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 CCL22O00626 93 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 DFNA5O60443 496 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 UGT1A9O60656 530 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 SUN1O94901 812 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 JUNDP17535 347 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 UGT1A6P19224 532 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 UGT1A1P22309 533 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 UGT1A4P22310 534 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 KELP23276 732 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 UGT1A3P35503 534 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 UGT1A5P35504 534 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 POLD2P49005 469 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 PDE1BQ01064 536 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 PPARDQ03181 441 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 DPTQ07507 201 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 BNIP3Q12983 259 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 FZD2Q14332 565 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 NFATC4Q14934 902 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 ANKRD22Q5VYY1 191 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 CASC4Q6P4E1 433 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 ZNF765Q7L2R6 523 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 PARGQ86W56 976 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 JAMLQ86YT9 394 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 OR13C4Q8NGS5 318 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 HIC2Q96JB3 615 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 SLC13A1Q9BZW2 595 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 UGT1A7Q9HAW7 530 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 UGT1A10Q9HAW8 530 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 UGT1A8Q9HAW9 530 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 IL17CQ9P0M4 197 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 KLQ9UEF7 1012 aa14.49□□□□□ -0.09
SGCE-204ENST00000428696 KNL1Q8NG31 2342 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 GLYATL1P3A0A0U1RQE8 302 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 TOR1BO14657 336 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 AVILO75366 819 aa14.48□□□□□ -0.09
SGCE-204ENST00000428696 SLC25A14O95258 325 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms