RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 TLR5O60602 858 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 PRNPP04156 253 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 FGF1P05230 155 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 CAPGP40121 348 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 ZNF280AP59817 542 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-208ENST00000428599 ITGA7Q13683 1181 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 FAM151BQ6UXP7 276 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 UBE2R2Q712K3 238 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-208ENST00000428599 SH3RF1Q7Z6J0 888 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 HDDC3Q8N4P3 179 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 AMER2Q8N7J2 671 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 ATP6V1C2Q8NEY4 427 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 BPIFB6Q8NFQ5 453 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 TSEN15Q8WW01 171 aaKnown RBP8.93□□□□□ -0.98
CTNND1-208ENST00000428599 NINJ2Q9NZG7 142 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 A0A1W2PQ67 120 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 A0A1W2PRG6 482 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 SIGLEC16A6NMB1 481 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 ZNF879B4DU55 563 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 CCL16O15467 120 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 SUV39H1O43463 412 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 PCCBP05166 539 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 SNRPB2P08579 225 aaKnown RBP8.93□□□□□ -0.98
CTNND1-208ENST00000428599 SPATA31C1P0DKV0 1188 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 IL12BP29460 328 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 MC4RP32245 332 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 DNASE1L1P49184 302 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 COLEC12Q5KU26 742 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 TMEM164Q5U3C3 297 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 PGBD2Q6P3X8 592 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 OR4L1Q8NH43 312 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 FNIP1Q8TF40 1166 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 DNAJC19Q96DA6 116 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 COX4I2Q96KJ9 171 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 GPR20Q99678 358 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 HSD17B14Q9BPX1 270 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 MRPL57Q9BQC6 102 aaKnown RBP8.93□□□□□ -0.98
CTNND1-208ENST00000428599 DCUN1D5Q9BTE7 237 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 SGK2Q9HBY8 427 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 IKZF2Q9UKS7 526 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 OGDHLQ9ULD0 1010 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 SSR3Q9UNL2 185 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 PCDHB11Q9Y5F2 797 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 RGSL1A5PLK6 1076 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 TEX46H3BTG2 121 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 NFKBIEO00221 500 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 RFXANKO14593 260 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 SNX4O95219 450 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 EPHX1P07099 455 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 SNHG28P0DPA3 235 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 TFEBP19484 476 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 NT5EP21589 574 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 ADRA1DP25100 572 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 AVPR1BP47901 424 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 EIF2B2P49770 351 aaKnown RBP8.93□□□□□ -0.98
CTNND1-208ENST00000428599 ZNF143P52747 638 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-208ENST00000428599 NRG3P56975 720 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 USP4Q13107 963 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 ZNF540Q8NDQ6 660 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 DNASE1L2Q92874 299 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 TESCQ96BS2 214 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 INPP4AQ96PE3 977 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-208ENST00000428599 EPB41L1Q9H4G0 881 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 SMURF2Q9HAU4 748 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.93□□□□□ -0.98
CTNND1-208ENST00000428599 PRKAB1Q9Y478 270 aa8.93□□□□□ -0.98
CTNND1-208ENST00000428599 GMFGO60234 142 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 UBXN7O94888 489 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 ERBB2P04626 1255 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 ZNF132P52740 706 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 RAB10P61026 200 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 CDK18Q07002 472 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 GRSF1Q12849 480 aaKnown RBP eCLIP8.92□□□□□ -0.98
CTNND1-208ENST00000428599 HKDC1Q2TB90 917 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 ZCCHC23Q6ZST2 131 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 LRRC17Q8N6Y2 441 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 POU5F2Q8N7G0 328 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 CDYL2Q8N8U2 506 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 OR2L5Q8NG80 312 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 ATXN2LQ8WWM7 1075 aaKnown RBP8.92□□□□□ -0.98
CTNND1-208ENST00000428599 PTCD3Q96EY7 689 aaKnown RBP8.92□□□□□ -0.98
CTNND1-208ENST00000428599 LMLNQ96KR4 655 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 ANKRD27Q96NW4 1050 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 KCNK4Q9NYG8 393 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 ING4Q9UNL4 249 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 F8VP50 259 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 PSMD11O00231 422 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 GJB6O95452 261 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 C22orf31O95567 290 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 SWI5Q1ZZU3 235 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 MINDY4Q4G0A6 757 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 PAPD7Q5XG87 772 aaKnown RBP8.92□□□□□ -0.98
CTNND1-208ENST00000428599 WDR93Q6P2C0 686 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 NYAP1Q6ZVC0 841 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 CHST9Q7L1S5 443 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 UNC5BQ8IZJ1 945 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 ZCCHC9Q8N567 271 aaKnown RBP8.92□□□□□ -0.98
CTNND1-208ENST00000428599 ANKRD52Q8NB46 1076 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 LINGO1Q96FE5 620 aa8.92□□□□□ -0.98
CTNND1-208ENST00000428599 PLIN3O60664 434 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms