RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 PKD2L2Q9NZM6 624 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 KLQ9UEF7 1012 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 ANKRD11Q6UB99 2663 aaPredicted RBP9.11□□□□□ -0.95
SMC1A-203ENST00000428014 GOLGA6CA6NDK9 693 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 GOLGA6BA6NDN3 693 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 C5orf60A6NFR6 353 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 TMX2-CTNND1H3BSU7 103 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 TRIM38O00635 465 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 SIGLEC6O43699 453 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 SOD1P00441 154 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 CAPNS1P04632 268 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 ANXA6P08133 673 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 ATXN1LP0C7T5 689 aaKnown RBP9.11□□□□□ -0.95
SMC1A-203ENST00000428014 GOLGA6DP0CG33 693 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 CD86P42081 329 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 TNNT3P45378 269 aaPredicted RBP9.11□□□□□ -0.95
SMC1A-203ENST00000428014 SPINT3P49223 89 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 CDK3Q00526 305 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 ITKQ08881 620 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 SQSTM1Q13501 440 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 IHHQ14623 411 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 NR1D2Q14995 579 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 RTP5Q14D33 572 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 ACOX1Q15067 660 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 ALG11Q2TAA5 492 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 CDCP2Q5VXM1 449 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 C4orf22Q6V702 233 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 GATAD2AQ86YP4 633 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 EID2Q8N6I1 236 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 PAF1Q8N7H5 531 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 ARL10Q8N8L6 244 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 ACTL9Q8TC94 416 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 PDCD6IPQ8WUM4 868 aaKnown RBP9.11□□□□□ -0.95
SMC1A-203ENST00000428014 MAIP1Q8WWC4 291 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 ALG3Q92685 438 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 KLK6Q92876 244 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 AP2M1Q96CW1 435 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 KCTD12Q96CX2 325 aaKnown RBP9.11□□□□□ -0.95
SMC1A-203ENST00000428014 APOLD1Q96LR9 279 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 CAMK1GQ96NX5 476 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 ALS2CR12Q96Q35 445 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 VPS35Q96QK1 796 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 FAM117AQ9C073 453 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 B3GNT4Q9C0J1 378 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 GBA3Q9H227 469 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 ZFYVE1Q9HBF4 777 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 GOLGA6AQ9NYA3 693 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 KLF15Q9UIH9 416 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 APPL1Q9UKG1 709 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 CA5BQ9Y2D0 317 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 DUSP10Q9Y6W6 482 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 PTPRBP23467 1997 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 APC2O95996 2303 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 IGF2RP11717 2491 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 ASXL3Q9C0F0 2248 aa9.11□□□□□ -0.95
SMC1A-203ENST00000428014 LY6G6EA0A0G2JKS1 128 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 PRSS38A1L453 326 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 KCNK3O14649 394 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 DDX3YO15523 660 aaKnown RBP9.1□□□□□ -0.95
SMC1A-203ENST00000428014 PSMD3O43242 534 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 NUDT21O43809 227 aaKnown RBP9.1□□□□□ -0.95
SMC1A-203ENST00000428014 GCATO75600 419 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 DXOO77932 396 aaKnown RBP9.1□□□□□ -0.95
SMC1A-203ENST00000428014 CEACAM5P06731 702 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 RBP3P10745 1247 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 PYGMP11217 842 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 PECAM1P16284 738 aaPredicted RBP9.1□□□□□ -0.95
SMC1A-203ENST00000428014 ITIH2P19823 946 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 PSMA3P25788 255 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 CD68P34810 354 aaPredicted RBP9.1□□□□□ -0.95
SMC1A-203ENST00000428014 MARCKSL1P49006 195 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 GEMP55040 296 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 NAP1L1P55209 391 aaKnown RBP9.1□□□□□ -0.95
SMC1A-203ENST00000428014 ADCY2Q08462 1091 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 EIF3IQ13347 325 aaKnown RBP9.1□□□□□ -0.95
SMC1A-203ENST00000428014 P3H1Q32P28 736 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 PRRT3Q5FWE3 981 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 TPRG1LQ5T0D9 272 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 FAXCQ5TGI0 409 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 KDELC1Q6UW63 502 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 UNQ6494/PRO21346Q6UXR6 183 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 RANBP10Q6VN20 620 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 Q6ZVL8 140 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 HSD11B1LQ7Z5J1 315 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 CCDC50Q8IVM0 306 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 SPNS2Q8IVW8 549 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 LSMEM2Q8N112 164 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 TRAM1L1Q8N609 369 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 ACRBPQ8NEB7 543 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 GPR156Q8NFN8 814 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 SLC35B2Q8TB61 432 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 BRSK1Q8TDC3 778 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 PEX13Q92968 403 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 TMEM159Q96B96 161 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 HIC2Q96JB3 615 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 SPATA13Q96N96 652 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 AGAP3Q96P47 875 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 DPYSL5Q9BPU6 564 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 GSDMCQ9BYG8 508 aa9.1□□□□□ -0.95
SMC1A-203ENST00000428014 ABCG8Q9H221 673 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms