RNA–Protein interactions for RNA: ENST00000427561.5

UBA1-205, Transcript of ubiquitin like modifier activating enzyme 1, human

TSL 5

Gene UBA1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA1-205	ENST00000427561	HAUS4	Q9H6D7	363 aa		13.64	□□□□□ -0.23
UBA1-205	ENST00000427561	MRPL47	Q9HD33	250 aa	Known RBP	13.64	□□□□□ -0.23
UBA1-205	ENST00000427561	PPIL1	Q9Y3C6	166 aa		13.64	□□□□□ -0.23
UBA1-205	ENST00000427561	ST14	Q9Y5Y6	855 aa		13.64	□□□□□ -0.23
UBA1-205	ENST00000427561	SETX	Q7Z333	2677 aa	Known RBP	13.64	□□□□□ -0.23
UBA1-205	ENST00000427561	CFAP46	Q8IYW2	2715 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	ASH1L	Q9NR48	2969 aa	Known RBP	13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	IGHV1OR21-1	A0A087WYE8	117 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	NPIPB15	A6NHN6	443 aa	Predicted RBP	13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	LRRC53	A6NM62	1247 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	SERPINB6	P35237	376 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	MMP13	P45452	471 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	ARSD	P51689	593 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	CDH6	P55285	790 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	MAX	P61244	160 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	NCAPH	Q15003	741 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	TMEM71	Q6P5X7	295 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	DOK6	Q6PKX4	331 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	POLN	Q7Z5Q5	900 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	TECPR1	Q7Z6L1	1165 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	TSPAN33	Q86UF1	283 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	ATPAF2	Q8N5M1	289 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	PTCD2	Q8WV60	388 aa	Known RBP	13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	ART4	Q93070	314 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	ZNF653	Q96CK0	615 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	AP2M1	Q96CW1	435 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	TRIM11	Q96F44	468 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	SCARF2	Q96GP6	870 aa	Predicted RBP	13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	OR2M4	Q96R27	311 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	FUCA2	Q9BTY2	467 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	DDA1	Q9BW61	102 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	ASPSCR1	Q9BZE9	553 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	HSD3B7	Q9H2F3	369 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	ADNP	Q9H2P0	1102 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	ETNK2	Q9NVF9	386 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	SLC39A1	Q9NY26	324 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	KCNK4	Q9NYG8	393 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	MYO1A	Q9UBC5	1043 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	B3GALT1	Q9Y5Z6	326 aa		13.63	□□□□□ -0.23
UBA1-205	ENST00000427561	FLNB	O75369	2602 aa	Known RBP	13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	MYO18B	Q8IUG5	2567 aa		13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	PYGL	P06737	847 aa		13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	MYBL1	P10243	752 aa		13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	THRA	P10827	490 aa		13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	CTPS1	P17812	591 aa		13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	IL1R2	P27930	398 aa		13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	UGT1A3	P35503	534 aa		13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	PPM1F	P49593	454 aa	Predicted RBP	13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	GPLD1	P80108	840 aa		13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	CLCA4	Q14CN2	919 aa		13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	PTPRR	Q15256	657 aa		13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	SMTNL2	Q2TAL5	461 aa		13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	BORA	Q6PGQ7	559 aa		13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	ADAMTSL4	Q6UY14	1074 aa		13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	NLRP8	Q86W28	1048 aa		13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	PIH1D2	Q8WWB5	315 aa		13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	HSPH1	Q92598	858 aa		13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	AHCYL2	Q96HN2	611 aa	Known RBP	13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	ZMYND15	Q9H091	742 aa		13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	ABCG8	Q9H221	673 aa		13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	AIPL1	Q9NZN9	384 aa		13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	CD84	Q9UIB8	345 aa		13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	TMEM98	Q9Y2Y6	226 aa		13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	PLEKHM1	Q9Y4G2	1056 aa		13.62	□□□□□ -0.23
UBA1-205	ENST00000427561	CYSRT1	A8MQ03	144 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561		B4E171	279 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	DDX3X	O00571	662 aa	Known RBP eCLIP	13.61	□□□□□ -0.23	3e-10	■■□□□ 11.8
UBA1-205	ENST00000427561	PDHA1	P08559	390 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	RARA	P10276	462 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	ZNF30	P17039	623 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	MPST	P25325	297 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	TSPAN7	P41732	249 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	PRKCI	P41743	596 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	FASLG	P48023	281 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	ITK	Q08881	620 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	KLHL30	Q0D2K2	578 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	PYCR3	Q53H96	274 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	DCAF12	Q5T6F0	453 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	LRRC66	Q68CR7	880 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	CAVIN1	Q6NZI2	390 aa	Known RBP	13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	ZNF765	Q7L2R6	523 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	FAM129C	Q86XR2	697 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	LRRC49	Q8IUZ0	686 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	CACNA2D3	Q8IZS8	1091 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	AOPEP	Q8N6M6	819 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	OR10G6	Q8NH81	332 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	PMEPA1	Q969W9	287 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	CSPG4P5	Q96PW8	444 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	SLC38A3	Q99624	504 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	NT5M	Q9NPB1	228 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	RTN4	Q9NQC3	1192 aa	Known RBP	13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	OCIAD1	Q9NX40	245 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	PDP2	Q9P2J9	529 aa		13.61	□□□□□ -0.23
UBA1-205	ENST00000427561	TRBV23OR9-2	A0A075B6M9	112 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561		A0A0J9YYE9	177 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	EFCAB7	A8K855	629 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	CAPN5	O15484	640 aa	Predicted RBP	13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms