RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 RABGEF1Q9UJ41 708 aa18.36■□□□□ 0.53
GPC1-205ENST00000427506 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.36■□□□□ 0.53
GPC1-205ENST00000427506 A0A0A6YYK5 440 aaPredicted RBP18.35■□□□□ 0.53
GPC1-205ENST00000427506 CASC3O15234 703 aaKnown RBP18.35■□□□□ 0.53
GPC1-205ENST00000427506 INPP4BO15327 924 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 ZRANB2O95218 330 aaKnown RBP eCLIP18.35■□□□□ 0.53
GPC1-205ENST00000427506 ASMTLO95671 621 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 FUCA1P04066 466 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 RPLP0P05388 317 aaKnown RBP18.35■□□□□ 0.53
GPC1-205ENST00000427506 EIF2S3P41091 472 aaKnown RBP18.35■□□□□ 0.53
GPC1-205ENST00000427506 ABCG1P45844 678 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 LSSP48449 732 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 NAP1L1P55209 391 aaKnown RBP18.35■□□□□ 0.53
GPC1-205ENST00000427506 CCL7P80098 99 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 GALNT3Q14435 633 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 PCSK7Q16549 785 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 TBC1D25Q3MII6 688 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 C14orf28Q4W4Y0 310 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 TFDP3Q5H9I0 405 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 FOXR1Q6PIV2 292 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 OGFOD3Q6PK18 319 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 DAAM2Q86T65 1068 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 TRIM74Q86UV6 250 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 NLRP8Q86W28 1048 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 TMTC1Q8IUR5 882 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 RCOR2Q8IZ40 523 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 Q8N9G6 341 aaPredicted RBP18.35■□□□□ 0.53
GPC1-205ENST00000427506 EXD1Q8NHP7 514 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 GPBAR1Q8TDU6 330 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 TFB1MQ8WVM0 346 aaKnown RBP18.35■□□□□ 0.53
GPC1-205ENST00000427506 IMP4Q96G21 291 aaKnown RBP18.35■□□□□ 0.53
GPC1-205ENST00000427506 HIC2Q96JB3 615 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 LYSMD1Q96S90 227 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 AGAP2Q99490 1192 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 SLC25A51Q9H1U9 297 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 TRNAU1APQ9NX07 287 aaKnown RBP18.35■□□□□ 0.53
GPC1-205ENST00000427506 PKD2L2Q9NZM6 624 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 SATB2Q9UPW6 733 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 SLC17A4Q9Y2C5 497 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 TMEM98Q9Y2Y6 226 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 ENTPD2Q9Y5L3 495 aa18.35■□□□□ 0.53
GPC1-205ENST00000427506 EPN1Q9Y6I3 576 aaPredicted RBP18.35■□□□□ 0.53
GPC1-205ENST00000427506 KNTC1P50748 2209 aa18.34■□□□□ 0.53
GPC1-205ENST00000427506 SOWAHDA6NJG2 315 aa18.34■□□□□ 0.53
GPC1-205ENST00000427506 NOBOXO60393 691 aa18.34■□□□□ 0.53
GPC1-205ENST00000427506 NDUFA10O95299 355 aa18.34■□□□□ 0.53
GPC1-205ENST00000427506 SOD1P00441 154 aa18.34■□□□□ 0.53
GPC1-205ENST00000427506 IVLP07476 585 aa18.34■□□□□ 0.53
GPC1-205ENST00000427506 GLB1P16278 677 aa18.34■□□□□ 0.53
GPC1-205ENST00000427506 BIRC2Q13490 618 aa18.34■□□□□ 0.53
GPC1-205ENST00000427506 TEX44Q53QW1 395 aa18.34■□□□□ 0.53
GPC1-205ENST00000427506 CCDC70Q6NSX1 233 aa18.34■□□□□ 0.53
GPC1-205ENST00000427506 C11orf63Q6NUN7 778 aa18.34■□□□□ 0.53
GPC1-205ENST00000427506 SLC30A9Q6PML9 568 aa18.34■□□□□ 0.53
GPC1-205ENST00000427506 MARK2Q7KZI7 788 aaKnown RBP18.34■□□□□ 0.53
GPC1-205ENST00000427506 SFTPA2Q8IWL1 248 aa18.34■□□□□ 0.53
GPC1-205ENST00000427506 RAVER1Q8IY67 606 aaKnown RBP18.34■□□□□ 0.53
GPC1-205ENST00000427506 KATNAL2Q8IYT4 538 aa18.34■□□□□ 0.53
GPC1-205ENST00000427506 SNIP1Q8TAD8 396 aaKnown RBP18.34■□□□□ 0.53
GPC1-205ENST00000427506 PTCD2Q8WV60 388 aaKnown RBP18.34■□□□□ 0.53
GPC1-205ENST00000427506 P3H4Q92791 437 aa18.34■□□□□ 0.53
GPC1-205ENST00000427506 RBM41Q96IZ5 413 aaKnown RBP18.34■□□□□ 0.53
GPC1-205ENST00000427506 ZNF578Q96N58 590 aaPredicted RBP18.34■□□□□ 0.53
GPC1-205ENST00000427506 CDH19Q9H159 772 aa18.34■□□□□ 0.53
GPC1-205ENST00000427506 SPATS2LQ9NUQ6 558 aaKnown RBP18.34■□□□□ 0.53
GPC1-205ENST00000427506 LRIT1Q9P2V4 623 aa18.34■□□□□ 0.53
GPC1-205ENST00000427506 DMXL2Q8TDJ6 3036 aa18.34■□□□□ 0.53
GPC1-205ENST00000427506 FREM2Q5SZK8 3169 aa18.34■□□□□ 0.53
GPC1-205ENST00000427506 NTN3O00634 580 aaPredicted RBP18.33■□□□□ 0.52
GPC1-205ENST00000427506 PECAM1P16284 738 aaPredicted RBP18.33■□□□□ 0.52
GPC1-205ENST00000427506 AK4P27144 223 aaPredicted RBP18.33■□□□□ 0.52
GPC1-205ENST00000427506 RBMS1P29558 406 aaKnown RBP18.33■□□□□ 0.52
GPC1-205ENST00000427506 ADCY8P40145 1251 aa18.33■□□□□ 0.52
GPC1-205ENST00000427506 SPINT3P49223 89 aa18.33■□□□□ 0.52
GPC1-205ENST00000427506 CTBSQ01459 385 aa18.33■□□□□ 0.52
GPC1-205ENST00000427506 PEX6Q13608 980 aa18.33■□□□□ 0.52
GPC1-205ENST00000427506 TAZQ16635 292 aa18.33■□□□□ 0.52
GPC1-205ENST00000427506 CERCAMQ5T4B2 595 aa18.33■□□□□ 0.52
GPC1-205ENST00000427506 ZC3H18Q86VM9 953 aaKnown RBP18.33■□□□□ 0.52
GPC1-205ENST00000427506 NRROSQ86YC3 692 aa18.33■□□□□ 0.52
GPC1-205ENST00000427506 CCNJLQ8IV13 435 aa18.33■□□□□ 0.52
GPC1-205ENST00000427506 SPATA22Q8NHS9 363 aa18.33■□□□□ 0.52
GPC1-205ENST00000427506 ZDHHC1Q8WTX9 485 aa18.33■□□□□ 0.52
GPC1-205ENST00000427506 HAUS1Q96CS2 278 aa18.33■□□□□ 0.52
GPC1-205ENST00000427506 OR2M4Q96R27 311 aa18.33■□□□□ 0.52
GPC1-205ENST00000427506 LRRN3Q9H3W5 708 aa18.33■□□□□ 0.52
GPC1-205ENST00000427506 FAM83DQ9H4H8 585 aa18.33■□□□□ 0.52
GPC1-205ENST00000427506 GLOD4Q9HC38 313 aa18.33■□□□□ 0.52
GPC1-205ENST00000427506 TAAR2Q9P1P5 351 aa18.33■□□□□ 0.52
GPC1-205ENST00000427506 RNF215Q9Y6U7 377 aa18.33■□□□□ 0.52
GPC1-205ENST00000427506 ZZEF1O43149 2961 aa18.33■□□□□ 0.52
GPC1-205ENST00000427506 PKD1L2Q7Z442 2459 aa18.32■□□□□ 0.52
GPC1-205ENST00000427506 hCG_1818297A0A087WSY0 165 aa18.32■□□□□ 0.52
GPC1-205ENST00000427506 MT-CYBP00156 380 aaPredicted RBP18.32■□□□□ 0.52
GPC1-205ENST00000427506 SLC4A1P02730 911 aa18.32■□□□□ 0.52
GPC1-205ENST00000427506 FGF1P05230 155 aa18.32■□□□□ 0.52
GPC1-205ENST00000427506 PIRTP0C851 137 aa18.32■□□□□ 0.52
GPC1-205ENST00000427506 PNLIPP16233 465 aa18.32■□□□□ 0.52
GPC1-205ENST00000427506 PTPN3P26045 913 aa18.32■□□□□ 0.52
GPC1-205ENST00000427506 ITPKBP27987 946 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms