RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 TRIB3Q96RU7 358 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 ERVK-6Q9BXR3 956 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 TUBB1Q9H4B7 451 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 SMPD4Q9NXE4 827 aa11.6□□□□□ -0.55
FIRRE-201ENST00000427391 OR6C75A6NL08 312 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 TBKBP1A7MCY6 615 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 MRASO14807 208 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 ACSL4O60488 711 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 SNAP91O60641 907 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 RHOBTB1O94844 696 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 PRLP01236 227 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 HSPA1AP0DMV8 641 aaKnown RBP11.59□□□□□ -0.55
FIRRE-201ENST00000427391 HSPA1BP0DMV9 641 aaKnown RBP11.59□□□□□ -0.55
FIRRE-201ENST00000427391 HLA-DPA1P20036 260 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 STC1P52823 247 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 SP3Q02447 781 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 KIF19Q2TAC6 998 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 C6orf52Q5T4I8 152 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 MRNIPQ6NTE8 343 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 LARP4Q71RC2 724 aaKnown RBP eCLIP11.59□□□□□ -0.552e-6■■■■■ 32.5
FIRRE-201ENST00000427391 LPGAT1Q92604 370 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 CCDC126Q96EE4 140 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 SCLYQ96I15 445 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 OLA1Q9NTK5 396 aaKnown RBP11.59□□□□□ -0.55
FIRRE-201ENST00000427391 SUPT3HB4E1H0 165 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 H3BNC9 293 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 NR5A2O00482 541 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 SLC22A2O15244 555 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 SUPT3HO75486 399 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 GALTP07902 379 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 ETS2P15036 469 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 OR1D2P34982 312 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 YBEYP58557 167 aaPredicted RBP11.59□□□□□ -0.55
FIRRE-201ENST00000427391 ACVR1Q04771 509 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 SQLEQ14534 574 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 NRF1Q16656 503 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 PSAPL1Q6NUJ1 521 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 SLC22A9Q8IVM8 553 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 CNBD2Q96M20 576 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 GPR21Q99679 349 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 AARSD1Q9BTE6 412 aaKnown RBP11.59□□□□□ -0.55
FIRRE-201ENST00000427391 ASB1Q9Y576 335 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 SQORQ9Y6N5 450 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 C15orf38-AP3S2A0A0A6YYH1 394 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 A0A1B0GTW7 788 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 NPEPPSL1A6NEC2 478 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 IQCF5A8MTL0 148 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 TRIM38O00635 465 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 COCHO43405 550 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 CLASP2O75122 1294 aaKnown RBP11.59□□□□□ -0.55
FIRRE-201ENST00000427391 NIPSNAP2O75323 286 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 OR6B1O95007 311 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 NDST3O95803 873 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 SNRPB2P08579 225 aaKnown RBP11.59□□□□□ -0.55
FIRRE-201ENST00000427391 ZDHHC11BP0C7U3 371 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 EEF1DP29692 281 aaKnown RBP11.59□□□□□ -0.55
FIRRE-201ENST00000427391 ADSLP30566 484 aaPredicted RBP11.59□□□□□ -0.55
FIRRE-201ENST00000427391 SLC7A2P52569 658 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 CAPRIN1Q14444 709 aaKnown RBP11.59□□□□□ -0.55
FIRRE-201ENST00000427391 VPS26BQ4G0F5 336 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 UGT3A1Q6NUS8 523 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 GLT6D1Q7Z4J2 308 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 ARPINQ7Z6K5 226 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 AMIGO2Q86SJ2 522 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 SDR16C5Q8N3Y7 309 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 TWIST2Q8WVJ9 160 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 L3HYPDHQ96EM0 354 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 RPL10LQ96L21 214 aaKnown RBP11.59□□□□□ -0.55
FIRRE-201ENST00000427391 ATOH8Q96SQ7 321 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 CINPQ9BW66 212 aaPredicted RBP11.59□□□□□ -0.55
FIRRE-201ENST00000427391 SARS2Q9NP81 518 aaKnown RBP11.59□□□□□ -0.55
FIRRE-201ENST00000427391 UTP6Q9NYH9 597 aaKnown RBP11.59□□□□□ -0.55
FIRRE-201ENST00000427391 UBA2Q9UBT2 640 aaPredicted RBP11.59□□□□□ -0.55
FIRRE-201ENST00000427391 FKBPLQ9UIM3 349 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 APPL1Q9UKG1 709 aa11.59□□□□□ -0.55
FIRRE-201ENST00000427391 PRSS51A0A1B0GVH4 220 aa11.58□□□□□ -0.56
FIRRE-201ENST00000427391 C2orf78A6NCI8 922 aa11.58□□□□□ -0.56
FIRRE-201ENST00000427391 SRP72O76094 671 aaKnown RBP11.58□□□□□ -0.56
FIRRE-201ENST00000427391 PRAMEF12O95522 483 aa11.58□□□□□ -0.56
FIRRE-201ENST00000427391 CRTAMO95727 393 aa11.58□□□□□ -0.56
FIRRE-201ENST00000427391 NELFEP18615 380 aaKnown RBP11.58□□□□□ -0.56
FIRRE-201ENST00000427391 ATP5C1P36542 298 aaKnown RBP11.58□□□□□ -0.56
FIRRE-201ENST00000427391 MAPKAPK2P49137 400 aa11.58□□□□□ -0.56
FIRRE-201ENST00000427391 ZNF140P52738 457 aaPredicted RBP11.58□□□□□ -0.56
FIRRE-201ENST00000427391 PTPRNQ16849 979 aa11.58□□□□□ -0.56
FIRRE-201ENST00000427391 FBXO22Q8NEZ5 403 aa11.58□□□□□ -0.56
FIRRE-201ENST00000427391 GABPB2Q8TAK5 448 aaPredicted RBP11.58□□□□□ -0.56
FIRRE-201ENST00000427391 LRTOMTQ8WZ04 291 aa11.58□□□□□ -0.56
FIRRE-201ENST00000427391 FATE1Q969F0 183 aa11.58□□□□□ -0.56
FIRRE-201ENST00000427391 RNF38Q9H0F5 515 aa11.58□□□□□ -0.56
FIRRE-201ENST00000427391 VCX3BQ9H321 246 aa11.58□□□□□ -0.56
FIRRE-201ENST00000427391 C6orf203Q9P0P8 240 aaPredicted RBP11.58□□□□□ -0.56
FIRRE-201ENST00000427391 PDP2Q9P2J9 529 aa11.58□□□□□ -0.56
FIRRE-201ENST00000427391 VPS28Q9UK41 221 aa11.58□□□□□ -0.56
FIRRE-201ENST00000427391 LRFN2Q9ULH4 789 aa11.58□□□□□ -0.56
FIRRE-201ENST00000427391 TBC1D4O60343 1298 aa11.58□□□□□ -0.56
FIRRE-201ENST00000427391 NRP2O60462 931 aa11.58□□□□□ -0.56
FIRRE-201ENST00000427391 SEC24AO95486 1093 aa11.58□□□□□ -0.56
FIRRE-201ENST00000427391 CES1P23141 567 aa11.58□□□□□ -0.56
FIRRE-201ENST00000427391 CORO1AP31146 461 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms