RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 CYSRT1A8MQ03 144 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 SNAP23O00161 211 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 PGRMC1O00264 195 aaKnown RBP5.22□□□□□ -1.57
LINC00458-202ENST00000427299 NDUFAB1O14561 156 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 CALUO43852 315 aaPredicted RBP5.22□□□□□ -1.57
LINC00458-202ENST00000427299 NMT2O60551 498 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 SNX2O60749 519 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 N4BP1O75113 896 aaKnown RBP5.22□□□□□ -1.57
LINC00458-202ENST00000427299 HEXIM1O94992 359 aaKnown RBP5.22□□□□□ -1.57
LINC00458-202ENST00000427299 SYF2O95926 243 aaKnown RBP5.22□□□□□ -1.57
LINC00458-202ENST00000427299 VIPP01282 170 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 FGF2P09038 288 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 CCDC172P0C7W6 258 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 CREB1P16220 341 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 NR1D1P20393 614 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 RBL1P28749 1068 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 BTDP43251 543 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 RXRGP48443 463 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 NAP1L1P55209 391 aaKnown RBP5.22□□□□□ -1.57
LINC00458-202ENST00000427299 GNGT1P63211 74 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 COASYQ13057 564 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 TRAF1Q13077 416 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 ITPK1Q13572 414 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 PRKG1Q13976 671 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 SLC18A3Q16572 532 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 DAB2IPQ5VWQ8 1189 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 ANKRD40Q6AI12 368 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 LRRC31Q6UY01 552 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 CCNI2Q6ZMN8 369 aaPredicted RBP5.22□□□□□ -1.57
LINC00458-202ENST00000427299 RFX8Q6ZV50 586 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 STXBP4Q6ZWJ1 553 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 RRAGAQ7L523 313 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 HOOK3Q86VS8 718 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 RASGRP3Q8IV61 690 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 CD302Q8IX05 232 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 ZC3H3Q8IXZ2 948 aaKnown RBP5.22□□□□□ -1.57
LINC00458-202ENST00000427299 CELF1Q92879 486 aaKnown RBP5.22□□□□□ -1.57
LINC00458-202ENST00000427299 THOC3Q96J01 351 aaKnown RBP5.22□□□□□ -1.57
LINC00458-202ENST00000427299 SPAG5Q96R06 1193 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 PABPC3Q9H361 631 aaKnown RBP5.22□□□□□ -1.57
LINC00458-202ENST00000427299 YY1AP1Q9H869 796 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 MLXIPQ9HAP2 919 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 PRDM8Q9NQV8 689 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 RXFP3Q9NSD7 469 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 FAM207AQ9NSI2 230 aaPredicted RBP5.22□□□□□ -1.57
LINC00458-202ENST00000427299 AGPAT5Q9NUQ2 364 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 TMEM51Q9NW97 253 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 HDAC6Q9UBN7 1215 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 TRIM10Q9UDY6 481 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 RSPH14Q9UHP6 348 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 GGA2Q9UJY4 613 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 FBXL5Q9UKA1 691 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 ATP6V0A2Q9Y487 856 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 GAKO14976 1311 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 GRIN2DO15399 1336 aa5.22□□□□□ -1.57
LINC00458-202ENST00000427299 COL2A1P02458 1487 aaPredicted RBP5.21□□□□□ -1.58
LINC00458-202ENST00000427299 GTPBP10A4D1E9 387 aaKnown RBP5.21□□□□□ -1.58
LINC00458-202ENST00000427299 FAM90A18PA6NE21 464 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 FAM90A16PA6NEW6 464 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 FAM90A9PA6NNJ1 464 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 FAM90A5PA8MXJ8 464 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 PRSS44E7EML9 344 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 H0YHG0 523 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 EIF3FO00303 357 aaPredicted RBP5.21□□□□□ -1.58
LINC00458-202ENST00000427299 CETN3O15182 167 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 DNPH1O43598 174 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 CYTH3O43739 400 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 MOCS3O95396 460 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 ITGA2BP08514 1039 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 FAM90A15PP0C7V4 464 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 FAM90A14PP0C7W9 464 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 MYZAPP0CAP1 466 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 PDHBP11177 359 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 CST5P28325 142 aaPredicted RBP5.21□□□□□ -1.58
LINC00458-202ENST00000427299 CDKN2AP42771 156 aaKnown RBP5.21□□□□□ -1.58
LINC00458-202ENST00000427299 NOVP48745 357 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 MRPL12P52815 198 aaKnown RBP5.21□□□□□ -1.58
LINC00458-202ENST00000427299 EIF3BP55884 814 aaKnown RBP5.21□□□□□ -1.58
LINC00458-202ENST00000427299 HSF1Q00613 529 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 CFHR3Q02985 330 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 KLHL30Q0D2K2 578 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 STK4Q13043 487 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 ZCWPW2Q504Y3 356 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 ZNF280DQ6N043 979 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 NFRKBQ6P4R8 1299 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 SLC44A2Q8IWA5 706 aaPredicted RBP5.21□□□□□ -1.58
LINC00458-202ENST00000427299 ADHFE1Q8IWW8 467 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 CNBD1Q8NA66 436 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 BCAS4Q8TDM0 211 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 USP13Q92995 863 aaPredicted RBP5.21□□□□□ -1.58
LINC00458-202ENST00000427299 RUNDC3BQ96NL0 473 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 MTMR9Q96QG7 549 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 FAM129AQ9BZQ8 928 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 RAB17Q9H0T7 212 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 STMN4Q9H169 189 aaPredicted RBP5.21□□□□□ -1.58
LINC00458-202ENST00000427299 TAF1DQ9H5J8 278 aaPredicted RBP5.21□□□□□ -1.58
LINC00458-202ENST00000427299 CNOT10Q9H9A5 744 aaKnown RBP5.21□□□□□ -1.58
LINC00458-202ENST00000427299 ACTR5Q9H9F9 607 aaPredicted RBP5.21□□□□□ -1.58
LINC00458-202ENST00000427299 ZCCHC17Q9NP64 241 aaKnown RBP5.21□□□□□ -1.58
LINC00458-202ENST00000427299 GDF3Q9NR23 364 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms