RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 MTHFRP42898 656 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 ARCN1P48444 511 aaKnown RBP14.42□□□□□ -0.1
PTPN13-203ENST00000427191 GALNT7Q86SF2 657 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 REPS2Q8NFH8 660 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 DISP2A7MBM2 1401 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 MYH11P35749 1972 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 A0A0G2JPF8 293 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 HNRNPCL3B7ZW38 293 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 KRT36O76013 467 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 PRH1P02810 166 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 HNRNPCL4P0DMR1 293 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 PRKAG1P54619 331 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 MAMLD1Q13495 774 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 KLHL22Q53GT1 634 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 EBNA1BP2Q99848 306 aaKnown RBP14.42□□□□□ -0.1
PTPN13-203ENST00000427191 ATXN3LQ9H3M9 355 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 ZNF639Q9UID6 485 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 FABP3P05413 133 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 PGM5Q15124 567 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 EIPR1Q53HC9 387 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 CLPTM1LQ96KA5 538 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 AIF1LQ9BQI0 150 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 FTHL17Q9BXU8 183 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 TMEM39BQ9GZU3 492 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 EMC3Q9P0I2 261 aa14.42□□□□□ -0.1
PTPN13-203ENST00000427191 E9PCH4 1651 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 FAM237BA0A1B0GVD1 139 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 ASLP04424 464 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 MPPE1Q53F39 396 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 FRMD7Q6ZUT3 714 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 FAM83AQ86UY5 434 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 C17orf50Q8WW18 174 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 PCDH12Q9NPG4 1184 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 THUMPD1Q9NXG2 353 aaKnown RBP14.41□□□□□ -0.1
PTPN13-203ENST00000427191 MAP2K7O14733 419 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 MARSP56192 900 aaKnown RBP14.41□□□□□ -0.1
PTPN13-203ENST00000427191 RAET1GQ6H3X3 334 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 AMIGO1Q86WK6 493 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 DEFB106AQ8N104 65 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 OR5T3Q8NGG3 340 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 MTFMTQ96DP5 389 aaKnown RBP14.41□□□□□ -0.1
PTPN13-203ENST00000427191 ZFP14Q9HCL3 533 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 ADGRE2Q9UHX3 823 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 FADS3Q9Y5Q0 445 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 CACNB4O00305 520 aaPredicted RBP14.41□□□□□ -0.1
PTPN13-203ENST00000427191 TRUB2O95900 331 aaKnown RBP14.41□□□□□ -0.1
PTPN13-203ENST00000427191 NDUFA9Q16795 377 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.41□□□□□ -0.1
PTPN13-203ENST00000427191 MAP4K3Q8IVH8 894 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 DNAAF2Q9NVR5 837 aaKnown RBP14.41□□□□□ -0.1
PTPN13-203ENST00000427191 PRR36Q9H6K5 1346 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 NRP2O60462 931 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 WEE1P30291 646 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 PRR5P85299 388 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 CAPN13Q6MZZ7 669 aaPredicted RBP14.41□□□□□ -0.1
PTPN13-203ENST00000427191 RD3Q7Z3Z2 195 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 SAMD14Q8IZD0 417 aaPredicted RBP14.41□□□□□ -0.1
PTPN13-203ENST00000427191 FAM13CQ8NE31 585 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 RAD51AP1Q96B01 352 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 GON4LQ3T8J9 2241 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 DDX3XO00571 662 aaKnown RBP eCLIP14.41□□□□□ -0.1
PTPN13-203ENST00000427191 SAGP10523 405 aaPredicted RBP14.41□□□□□ -0.1
PTPN13-203ENST00000427191 KCNA5P22460 613 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 RBL1P28749 1068 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 SLC7A2P52569 658 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 HSPA14Q0VDF9 509 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 SLC25A25Q6KCM7 469 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 FCRL4Q96PJ5 515 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 TRNT1Q96Q11 434 aaKnown RBP14.41□□□□□ -0.1
PTPN13-203ENST00000427191 CLDN25C9JDP6 229 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 KCNK1O00180 336 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 TFECO14948 347 aaPredicted RBP14.41□□□□□ -0.1
PTPN13-203ENST00000427191 PIGXQ8TBF5 258 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 CITED4Q96RK1 184 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 ZNF347Q96SE7 839 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 RHOJQ9H4E5 214 aa14.41□□□□□ -0.1
PTPN13-203ENST00000427191 PPEF2O14830 753 aa14.4□□□□□ -0.1
PTPN13-203ENST00000427191 PTGS2P35354 604 aa14.4□□□□□ -0.1
PTPN13-203ENST00000427191 MAPK10P53779 464 aa14.4□□□□□ -0.1
PTPN13-203ENST00000427191 SLC25A3Q00325 362 aa14.4□□□□□ -0.1
PTPN13-203ENST00000427191 MFSD10Q14728 455 aa14.4□□□□□ -0.1
PTPN13-203ENST00000427191 ZNF615Q8N8J6 731 aa14.4□□□□□ -0.1
PTPN13-203ENST00000427191 CLTCQ00610 1675 aaKnown RBP14.4□□□□□ -0.1
PTPN13-203ENST00000427191 CAPN15O75808 1086 aa14.4□□□□□ -0.1
PTPN13-203ENST00000427191 USP17L7P0C7H9 530 aa14.4□□□□□ -0.1
PTPN13-203ENST00000427191 DNASE1L1P49184 302 aa14.4□□□□□ -0.1
PTPN13-203ENST00000427191 RPP38P78345 283 aaKnown RBP14.4□□□□□ -0.1
PTPN13-203ENST00000427191 FAM153CQ494X1 144 aa14.4□□□□□ -0.1
PTPN13-203ENST00000427191 CPSF7Q8N684 471 aaKnown RBP14.4□□□□□ -0.1
PTPN13-203ENST00000427191 KIAA0895Q8NCT3 520 aa14.4□□□□□ -0.1
PTPN13-203ENST00000427191 TLX3O43711 291 aaPredicted RBP14.4□□□□□ -0.1
PTPN13-203ENST00000427191 TRBC1P01850 177 aa14.4□□□□□ -0.1
PTPN13-203ENST00000427191 GCNT6Q5T4J0 391 aa14.4□□□□□ -0.1
PTPN13-203ENST00000427191 DOK6Q6PKX4 331 aa14.4□□□□□ -0.1
PTPN13-203ENST00000427191 GAL3ST3Q96A11 431 aa14.4□□□□□ -0.1
PTPN13-203ENST00000427191 FDXACB1Q9BRP7 624 aaPredicted RBP14.4□□□□□ -0.1
PTPN13-203ENST00000427191 CARD8Q9Y2G2 431 aa14.4□□□□□ -0.1
PTPN13-203ENST00000427191 TRPV2Q9Y5S1 764 aa14.4□□□□□ -0.1
PTPN13-203ENST00000427191 CEMIPQ8WUJ3 1361 aa14.4□□□□□ -0.1
PTPN13-203ENST00000427191 BRMS1LQ5PSV4 323 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms