RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 HACD1B0YJ81 288 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 INPP4BO15327 924 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 YY2O15391 372 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 FUCA1P04066 466 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 RBP3P10745 1247 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 CKMT1AP12532 417 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 CTSEP14091 401 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 CHRNA4P43681 627 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 GPR1P46091 355 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 EIF3EP60228 445 aaKnown RBP13.58□□□□□ -0.24
SNX3-204ENST00000426155 SMAD1Q15797 465 aaKnown RBP13.58□□□□□ -0.24
SNX3-204ENST00000426155 ALS2CLQ60I27 953 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 ZCCHC8Q6NZY4 707 aaKnown RBP13.58□□□□□ -0.24
SNX3-204ENST00000426155 GUSBP11Q6P575 273 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 KDELC1Q6UW63 502 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 PID1Q7Z2X4 250 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 SLC35F3Q8IY50 421 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 TXLNBQ8N3L3 684 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 UBL4BQ8N7F7 174 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 CCDC112Q8NEF3 446 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 HES6Q96HZ4 224 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 RIOK2Q9BVS4 552 aaKnown RBP13.58□□□□□ -0.24
SNX3-204ENST00000426155 TEX101Q9BY14 249 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 ADGRE3Q9BY15 652 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 TMEM168Q9H0V1 697 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 GRPEL1Q9HAV7 217 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 CYP4F12Q9HCS2 524 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 LZTFL1Q9NQ48 299 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 SIRPGQ9P1W8 387 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 RSPH14Q9UHP6 348 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 EFR3BQ9Y2G0 817 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 R3HDM2Q9Y2K5 976 aaKnown RBP13.58□□□□□ -0.24
SNX3-204ENST00000426155 ZNF711Q9Y462 761 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 PCDHGA1Q9Y5H4 931 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 CSNK1G3Q9Y6M4 447 aa13.58□□□□□ -0.24
SNX3-204ENST00000426155 FAM221BA6H8Z2 402 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 GOLGA6L3A6NEY3 463 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 MIF4GDA9UHW6 222 aaKnown RBP13.57□□□□□ -0.24
SNX3-204ENST00000426155 LMO7DNF2Z398 122 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 AURKAO14965 403 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 MTSS1O43312 755 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 TNFP01375 233 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 CEACAM5P06731 702 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 ANXA6P08133 673 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 WNT3AP56704 352 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 INSM1Q01101 510 aaPredicted RBP13.57□□□□□ -0.24
SNX3-204ENST00000426155 DPTQ07507 201 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 XRCC4Q13426 336 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 OLIG2Q13516 323 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 C6orf132Q5T0Z8 1188 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 HES3Q5TGS1 186 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 CCNI2Q6ZMN8 369 aaPredicted RBP13.57□□□□□ -0.24
SNX3-204ENST00000426155 CDKL3Q8IVW4 592 aaPredicted RBP13.57□□□□□ -0.24
SNX3-204ENST00000426155 SLC25A41Q8N5S1 370 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 FAM181AQ8N9Y4 354 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 KYQ8NBH2 561 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 IPMKQ8NFU5 416 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 ATL2Q8NHH9 583 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 MRGPRX2Q96LB1 330 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 TBATAQ96M53 351 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 DUSP23Q9BVJ7 150 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 BOCQ9BWV1 1114 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 FRMD8Q9BZ67 464 aaPredicted RBP13.57□□□□□ -0.24
SNX3-204ENST00000426155 TSGA10Q9BZW7 698 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 CARS2Q9HA77 564 aaKnown RBP13.57□□□□□ -0.24
SNX3-204ENST00000426155 PHPT1Q9NRX4 125 aaPredicted RBP13.57□□□□□ -0.24
SNX3-204ENST00000426155 FAM153AQ9UHL3 310 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 TMEM98Q9Y2Y6 226 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 DGKBQ9Y6T7 804 aa13.57□□□□□ -0.24
SNX3-204ENST00000426155 KMT2BQ9UMN6 2715 aaPredicted RBP13.56□□□□□ -0.24
SNX3-204ENST00000426155 CPED1A4D0V7 1026 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 FADS2P1A8MWK0 482 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 TPP1O14773 563 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 KCNN4O15554 427 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 KRT86O43790 486 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 TJP3O95049 919 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 NDST3O95803 873 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 PTMAP06454 111 aaKnown RBP13.56□□□□□ -0.24
SNX3-204ENST00000426155 HOXC4P09017 264 aaPredicted RBP13.56□□□□□ -0.24
SNX3-204ENST00000426155 KELP23276 732 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 PSMB4P28070 264 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 GNPDA1P46926 289 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 SPINT3P49223 89 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 BLKP51451 505 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 KLF1Q13351 362 aaPredicted RBP13.56□□□□□ -0.24
SNX3-204ENST00000426155 ELOCQ15369 112 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 SLC14A2Q15849 920 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 SIRPB2Q5JXA9 342 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 PERM1Q5SV97 790 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 HENMT1Q5T8I9 393 aaKnown RBP13.56□□□□□ -0.24
SNX3-204ENST00000426155 DARS2Q6PI48 645 aaKnown RBP13.56□□□□□ -0.24
SNX3-204ENST00000426155 ADAMTSL4Q6UY14 1074 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 MARK2Q7KZI7 788 aaKnown RBP13.56□□□□□ -0.24
SNX3-204ENST00000426155 ZNF765Q7L2R6 523 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 EFL1Q7Z2Z2 1120 aaKnown RBP13.56□□□□□ -0.24
SNX3-204ENST00000426155 FSTL5Q8N475 847 aaPredicted RBP13.56□□□□□ -0.24
SNX3-204ENST00000426155 RNF10Q8N5U6 811 aaKnown RBP13.56□□□□□ -0.24
SNX3-204ENST00000426155 CCDC110Q8TBZ0 833 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 IFI44Q8TCB0 444 aa13.56□□□□□ -0.24
SNX3-204ENST00000426155 ATG4AQ8WYN0 398 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms