RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 TEX19Q8NA77 164 aa13.48□□□□□ -0.25
VEGFB-202ENST00000426086 AHCYL2Q96HN2 611 aaKnown RBP13.48□□□□□ -0.25
VEGFB-202ENST00000426086 OR2M4Q96R27 311 aa13.48□□□□□ -0.25
VEGFB-202ENST00000426086 AGAP2Q99490 1192 aa13.48□□□□□ -0.25
VEGFB-202ENST00000426086 DPYSL5Q9BPU6 564 aa13.48□□□□□ -0.25
VEGFB-202ENST00000426086 CINPQ9BW66 212 aaPredicted RBP13.48□□□□□ -0.25
VEGFB-202ENST00000426086 ZMYND15Q9H091 742 aa13.48□□□□□ -0.25
VEGFB-202ENST00000426086 FBXO8Q9NRD0 319 aa13.48□□□□□ -0.25
VEGFB-202ENST00000426086 GOLGA6AQ9NYA3 693 aa13.48□□□□□ -0.25
VEGFB-202ENST00000426086 KLHL3Q9UH77 587 aa13.48□□□□□ -0.25
VEGFB-202ENST00000426086 CD84Q9UIB8 345 aa13.48□□□□□ -0.25
VEGFB-202ENST00000426086 RPS6KL1Q9Y6S9 549 aa13.48□□□□□ -0.25
VEGFB-202ENST00000426086 TNRC6AQ8NDV7 1962 aaKnown RBP13.48□□□□□ -0.25
VEGFB-202ENST00000426086 LRRK2Q5S007 2527 aa13.48□□□□□ -0.25
VEGFB-202ENST00000426086 A1L4Q6 167 aa13.47□□□□□ -0.25
VEGFB-202ENST00000426086 ARHGAP42A6NI28 874 aa13.47□□□□□ -0.25
VEGFB-202ENST00000426086 SIGLEC16A6NMB1 481 aa13.47□□□□□ -0.25
VEGFB-202ENST00000426086 FGF10O15520 208 aaPredicted RBP13.47□□□□□ -0.25
VEGFB-202ENST00000426086 HTRA2O43464 458 aaPredicted RBP13.47□□□□□ -0.25
VEGFB-202ENST00000426086 COL8A1P27658 744 aa13.47□□□□□ -0.25
VEGFB-202ENST00000426086 ERCC5P28715 1186 aaPredicted RBP13.47□□□□□ -0.25
VEGFB-202ENST00000426086 PPM1FP49593 454 aaPredicted RBP13.47□□□□□ -0.25
VEGFB-202ENST00000426086 ZNF143P52747 638 aaPredicted RBP13.47□□□□□ -0.25
VEGFB-202ENST00000426086 POLR2LP62875 67 aaKnown RBP13.47□□□□□ -0.25
VEGFB-202ENST00000426086 NSUN2Q08J23 767 aaKnown RBP eCLIP13.47□□□□□ -0.25
VEGFB-202ENST00000426086 TRAF2Q12933 501 aa13.47□□□□□ -0.25
VEGFB-202ENST00000426086 SEPT6Q14141 434 aa13.47□□□□□ -0.25
VEGFB-202ENST00000426086 ERV3-1Q14264 604 aa13.47□□□□□ -0.25
VEGFB-202ENST00000426086 CRTC2Q53ET0 693 aaPredicted RBP13.47□□□□□ -0.25
VEGFB-202ENST00000426086 PYCR3Q53H96 274 aa13.47□□□□□ -0.25
VEGFB-202ENST00000426086 ASB18Q6ZVZ8 466 aa13.47□□□□□ -0.25
VEGFB-202ENST00000426086 TECPR1Q7Z6L1 1165 aa13.47□□□□□ -0.25
VEGFB-202ENST00000426086 CCDC13Q8IYE1 715 aa13.47□□□□□ -0.25
VEGFB-202ENST00000426086 C3orf20Q8ND61 904 aa13.47□□□□□ -0.25
VEGFB-202ENST00000426086 OR10G6Q8NH81 332 aa13.47□□□□□ -0.25
VEGFB-202ENST00000426086 PDCD6IPQ8WUM4 868 aaKnown RBP13.47□□□□□ -0.25
VEGFB-202ENST00000426086 NCSTNQ92542 709 aa13.47□□□□□ -0.25
VEGFB-202ENST00000426086 MCEEQ96PE7 176 aa13.47□□□□□ -0.25
VEGFB-202ENST00000426086 SLC38A3Q99624 504 aa13.47□□□□□ -0.25
VEGFB-202ENST00000426086 EFHD1Q9BUP0 239 aa13.47□□□□□ -0.25
VEGFB-202ENST00000426086 VPS16Q9H269 839 aa13.47□□□□□ -0.25
VEGFB-202ENST00000426086 SIDT1Q9NXL6 827 aaKnown RBP13.47□□□□□ -0.25
VEGFB-202ENST00000426086 ADAM22Q9P0K1 906 aa13.47□□□□□ -0.25
VEGFB-202ENST00000426086 TLK1Q9UKI8 766 aa13.47□□□□□ -0.25
VEGFB-202ENST00000426086 PRKAB1Q9Y478 270 aa13.47□□□□□ -0.25
VEGFB-202ENST00000426086 DFFAO00273 331 aa13.46□□□□□ -0.25
VEGFB-202ENST00000426086 DNAJB5O75953 348 aa13.46□□□□□ -0.25
VEGFB-202ENST00000426086 JAM2P57087 298 aa13.46□□□□□ -0.25
VEGFB-202ENST00000426086 NFATC2Q13469 925 aa13.46□□□□□ -0.25
VEGFB-202ENST00000426086 TPD52L1Q16890 204 aaPredicted RBP13.46□□□□□ -0.25
VEGFB-202ENST00000426086 PPP1R15BQ5SWA1 713 aa13.46□□□□□ -0.25
VEGFB-202ENST00000426086 WDR74Q6RFH5 385 aaPredicted RBP13.46□□□□□ -0.25
VEGFB-202ENST00000426086 MON1BQ7L1V2 547 aa13.46□□□□□ -0.25
VEGFB-202ENST00000426086 PHF13Q86YI8 300 aaPredicted RBP13.46□□□□□ -0.25
VEGFB-202ENST00000426086 ARFGAP1Q8N6T3 406 aa13.46□□□□□ -0.25
VEGFB-202ENST00000426086 SPOCK2Q92563 424 aa13.46□□□□□ -0.25
VEGFB-202ENST00000426086 SCAMP4Q969E2 229 aa13.46□□□□□ -0.25
VEGFB-202ENST00000426086 PSKH2Q96QS6 385 aa13.46□□□□□ -0.25
VEGFB-202ENST00000426086 PEBP4Q96S96 227 aa13.46□□□□□ -0.25
VEGFB-202ENST00000426086 TRIM55Q9BYV6 548 aa13.46□□□□□ -0.25
VEGFB-202ENST00000426086 ABCG8Q9H221 673 aa13.46□□□□□ -0.25
VEGFB-202ENST00000426086 SP110Q9HB58 689 aa13.46□□□□□ -0.25
VEGFB-202ENST00000426086 NLRC4Q9NPP4 1024 aa13.46□□□□□ -0.25
VEGFB-202ENST00000426086 PRDM8Q9NQV8 689 aa13.46□□□□□ -0.25
VEGFB-202ENST00000426086 SAMSN1Q9NSI8 373 aaKnown RBP13.46□□□□□ -0.25
VEGFB-202ENST00000426086 CROTQ9UKG9 612 aa13.46□□□□□ -0.25
VEGFB-202ENST00000426086 KCTD3Q9Y597 815 aa13.46□□□□□ -0.25
VEGFB-202ENST00000426086 TEX15Q9BXT5 2789 aa13.46□□□□□ -0.26
VEGFB-202ENST00000426086 USP9XQ93008 2570 aaPredicted RBP13.45□□□□□ -0.26
VEGFB-202ENST00000426086 MKRN2OSH3BPM6 223 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 EEF2KO00418 725 aaKnown RBP13.45□□□□□ -0.26
VEGFB-202ENST00000426086 PES1O00541 588 aaKnown RBP13.45□□□□□ -0.26
VEGFB-202ENST00000426086 POLR1CO15160 346 aaPredicted RBP13.45□□□□□ -0.26
VEGFB-202ENST00000426086 PEX11BO96011 259 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 CPP00450 1065 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 CTPS1P17812 591 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 ERCC2P18074 760 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 TEAD1P28347 426 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 SOX5P35711 763 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 DLSTP36957 453 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 MAPK9P45984 424 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 GPR1P46091 355 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 NSFP46459 744 aaKnown RBP13.45□□□□□ -0.26
VEGFB-202ENST00000426086 GFERP55789 205 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 AP1S1P61966 158 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 MC1RQ01726 317 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 HHEXQ03014 270 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 IL10RBQ08334 325 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 CLEC16AQ2KHT3 1053 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 FHL5Q5TD97 284 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 ZNF787Q6DD87 383 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 CYP4V2Q6ZWL3 525 aaPredicted RBP13.45□□□□□ -0.26
VEGFB-202ENST00000426086 SSC4DQ8WTU2 575 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 KCTD15Q96SI1 283 aaPredicted RBP13.45□□□□□ -0.26
VEGFB-202ENST00000426086 TBC1D10AQ9BXI6 508 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 DHX35Q9H5Z1 703 aaKnown RBP13.45□□□□□ -0.26
VEGFB-202ENST00000426086 NOD2Q9HC29 1040 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 TBC1D29Q9UFV1 150 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 AP4E1Q9UPM8 1137 aa13.45□□□□□ -0.26
VEGFB-202ENST00000426086 NBPF19A0A087WUL8 3843 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms