RNA–Protein interactions for RNA: ENST00000425428.6

CD44-207, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,768 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-207ENST00000425428 CRYMQ14894 314 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 KYNUQ16719 465 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 ZNF528Q3MIS6 628 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 GPR33Q49SQ1 333 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 MSS51Q4VC12 460 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 WDR45BQ5MNZ6 344 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 RNF187Q5TA31 235 aaPredicted RBP10.07□□□□□ -0.8
CD44-207ENST00000425428 LGSNQ5TDP6 509 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 KIAA0895LQ68EN5 471 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 ZNF449Q6P9G9 518 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 ZC3H14Q6PJT7 736 aaKnown RBP10.07□□□□□ -0.8
CD44-207ENST00000425428 CERS6Q6ZMG9 384 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 ZNF765Q7L2R6 523 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 KCNMB4Q86W47 210 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 CTAGE3PQ8IX95 158 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 TTC30BQ8N4P2 665 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 TMEM105Q8N8V8 129 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 OR4L1Q8NH43 312 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 HNRNPLLQ8WVV9 542 aaKnown RBP10.07□□□□□ -0.8
CD44-207ENST00000425428 ASB12Q8WXK4 309 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 HDAC10Q969S8 669 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 DCUN1D1Q96GG9 259 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 CDKN2AIPNLQ96HQ2 116 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 PWWP2AQ96N64 755 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 CYTH2Q99418 400 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 CCDC68Q9H2F9 335 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 CDC42EP4Q9H3Q1 356 aaKnown RBP10.07□□□□□ -0.8
CD44-207ENST00000425428 EPHX3Q9H6B9 360 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 ASB8Q9H765 288 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 PPCSQ9HAB8 311 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 SERGEFQ9UGK8 458 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 PLXND1Q9Y4D7 1925 aa10.07□□□□□ -0.8
CD44-207ENST00000425428 IGHV1OR15-9A0A0B4J2B8 117 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 H7C0S8 307 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 K7ESF4 209 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 MAGEC1O60732 1142 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 NDUFS3O75489 264 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 BANF1O75531 89 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 PRAMEF1O95521 474 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 HNRNPA2B1P22626 353 aaKnown RBP10.06□□□□□ -0.8
CD44-207ENST00000425428 HTR1BP28222 390 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 NMBRP28336 390 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 ECHS1P30084 290 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 MAT2AP31153 395 aaKnown RBP10.06□□□□□ -0.8
CD44-207ENST00000425428 MC4RP32245 332 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 ETV3P41162 512 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 DPP6P42658 865 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 FNTBP49356 437 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 MGAT5Q09328 741 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 RALGDSQ12967 914 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 NAB1Q13506 487 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 GTF2H3Q13889 308 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 STAT4Q14765 748 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 NUMA1Q14980 2115 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 ALS2CLQ60I27 953 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 ESRP1Q6NXG1 681 aaKnown RBP10.06□□□□□ -0.8
CD44-207ENST00000425428 FAM151BQ6UXP7 276 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 UNC5AQ6ZN44 842 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 Q6ZVL8 140 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 HSD11B1LQ7Z5J1 315 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 SNX20Q7Z614 316 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 NLRP8Q86W28 1048 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 RGL4Q8IZJ4 473 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 TRAM1L1Q8N609 369 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 DENND6BQ8NEG7 585 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 OR13C4Q8NGS5 318 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 ZNF398Q8TD17 642 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 DTX3LQ8TDB6 740 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 AENQ8WTP8 325 aaKnown RBP10.06□□□□□ -0.8
CD44-207ENST00000425428 SCG3Q8WXD2 468 aaKnown RBP10.06□□□□□ -0.8
CD44-207ENST00000425428 RLN3Q8WXF3 142 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 FAM131CQ96AQ9 280 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 MFSD3Q96ES6 412 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 DTD2Q96FN9 168 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 CERS2Q96G23 380 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 PKNOX2Q96KN3 472 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 IRF2BPLQ9H1B7 796 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 FKBPLQ9UIM3 349 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 RAB23Q9ULC3 237 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 THADAQ6YHU6 1953 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 BDP1A6H8Y1 2624 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 ZDBF2Q9HCK1 2354 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 EXOC1LA0A1B0GW35 172 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 GOLGA6L10A6NI86 522 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 PRAMEF26H0Y7S4 382 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 CACNB4O00305 520 aaPredicted RBP10.06□□□□□ -0.8
CD44-207ENST00000425428 TOR1BO14657 336 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 AURKAO14965 403 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 TP73O15350 636 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 SLC31A1O15431 190 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 CD3EAPO15446 510 aaKnown RBP10.06□□□□□ -0.8
CD44-207ENST00000425428 GPR37L1O60883 481 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 SRP72O76094 671 aaKnown RBP10.06□□□□□ -0.8
CD44-207ENST00000425428 PAK4O96013 591 aaPredicted RBP10.06□□□□□ -0.8
CD44-207ENST00000425428 INHBAP08476 426 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 ABHD2P08910 425 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 C1SP09871 688 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 FAM153BP0C7A2 387 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 GNSP15586 552 aa10.06□□□□□ -0.8
CD44-207ENST00000425428 BPIP17213 487 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms