RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 IPMKQ8NFU5 416 aa22.26■■□□□ 1.15
PTCHD3P2-201ENST00000424937 RIOK2Q9BVS4 552 aaKnown RBP22.26■■□□□ 1.15
PTCHD3P2-201ENST00000424937 CLPBQ9H078 707 aa22.26■■□□□ 1.15
PTCHD3P2-201ENST00000424937 SHOC2Q9UQ13 582 aa22.26■■□□□ 1.15
PTCHD3P2-201ENST00000424937 R3HDM2Q9Y2K5 976 aaKnown RBP22.26■■□□□ 1.15
PTCHD3P2-201ENST00000424937 ANXA6P08133 673 aa22.25■■□□□ 1.15
PTCHD3P2-201ENST00000424937 SPINT3P49223 89 aa22.25■■□□□ 1.15
PTCHD3P2-201ENST00000424937 MPP3Q13368 585 aa22.25■■□□□ 1.15
PTCHD3P2-201ENST00000424937 ELOCQ15369 112 aa22.25■■□□□ 1.15
PTCHD3P2-201ENST00000424937 RPS6KA1Q15418 735 aa22.25■■□□□ 1.15
PTCHD3P2-201ENST00000424937 ANKRD20A2Q5SQ80 823 aa22.25■■□□□ 1.15
PTCHD3P2-201ENST00000424937 ANKRD20A1Q5TYW2 823 aa22.25■■□□□ 1.15
PTCHD3P2-201ENST00000424937 ANKRD20A3Q5VUR7 823 aa22.25■■□□□ 1.15
PTCHD3P2-201ENST00000424937 ZCCHC8Q6NZY4 707 aaKnown RBP22.25■■□□□ 1.15
PTCHD3P2-201ENST00000424937 DHRS13Q6UX07 377 aa22.25■■□□□ 1.15
PTCHD3P2-201ENST00000424937 FSTL5Q8N475 847 aaPredicted RBP22.25■■□□□ 1.15
PTCHD3P2-201ENST00000424937 MRGPRX2Q96LB1 330 aa22.25■■□□□ 1.15
PTCHD3P2-201ENST00000424937 APOLD1Q96LR9 279 aa22.25■■□□□ 1.15
PTCHD3P2-201ENST00000424937 FSD1LQ9BXM9 530 aa22.25■■□□□ 1.15
PTCHD3P2-201ENST00000424937 SUDS3Q9H7L9 328 aaPredicted RBP22.25■■□□□ 1.15
PTCHD3P2-201ENST00000424937 ZFYVE1Q9HBF4 777 aa22.25■■□□□ 1.15
PTCHD3P2-201ENST00000424937 MAGEE1Q9HCI5 957 aa22.25■■□□□ 1.15
PTCHD3P2-201ENST00000424937 CYP4F12Q9HCS2 524 aa22.25■■□□□ 1.15
PTCHD3P2-201ENST00000424937 DOLKQ9UPQ8 538 aa22.25■■□□□ 1.15
PTCHD3P2-201ENST00000424937 PCDHGA1Q9Y5H4 931 aa22.25■■□□□ 1.15
PTCHD3P2-201ENST00000424937 DGKBQ9Y6T7 804 aa22.25■■□□□ 1.15
PTCHD3P2-201ENST00000424937 PRSS38A1L453 326 aa22.24■■□□□ 1.15
PTCHD3P2-201ENST00000424937 LMO7DNF2Z398 122 aa22.24■■□□□ 1.15
PTCHD3P2-201ENST00000424937 TNFRSF10CO14798 259 aa22.24■■□□□ 1.15
PTCHD3P2-201ENST00000424937 MYF5P13349 255 aa22.24■■□□□ 1.15
PTCHD3P2-201ENST00000424937 PSMB4P28070 264 aa22.24■■□□□ 1.15
PTCHD3P2-201ENST00000424937 CHRNA4P43681 627 aa22.24■■□□□ 1.15
PTCHD3P2-201ENST00000424937 GEMP55040 296 aa22.24■■□□□ 1.15
PTCHD3P2-201ENST00000424937 DOK6Q6PKX4 331 aa22.24■■□□□ 1.15
PTCHD3P2-201ENST00000424937 ADAMTSL4Q6UY14 1074 aa22.24■■□□□ 1.15
PTCHD3P2-201ENST00000424937 RAVER1Q8IY67 606 aaKnown RBP22.24■■□□□ 1.15
PTCHD3P2-201ENST00000424937 SLC25A41Q8N5S1 370 aa22.24■■□□□ 1.15
PTCHD3P2-201ENST00000424937 TRIM58Q8NG06 486 aa22.24■■□□□ 1.15
PTCHD3P2-201ENST00000424937 CCDC110Q8TBZ0 833 aa22.24■■□□□ 1.15
PTCHD3P2-201ENST00000424937 UBE2Q2Q8WVN8 375 aa22.24■■□□□ 1.15
PTCHD3P2-201ENST00000424937 SPATA13Q96N96 652 aa22.24■■□□□ 1.15
PTCHD3P2-201ENST00000424937 AGAP2Q99490 1192 aa22.24■■□□□ 1.15
PTCHD3P2-201ENST00000424937 GPR63Q9BZJ6 419 aa22.24■■□□□ 1.15
PTCHD3P2-201ENST00000424937 NEUROG3Q9Y4Z2 214 aa22.24■■□□□ 1.15
PTCHD3P2-201ENST00000424937 LOC285095A0A1B0GVY8 99 aa22.23■■□□□ 1.15
PTCHD3P2-201ENST00000424937 TPP1O14773 563 aa22.23■■□□□ 1.15
PTCHD3P2-201ENST00000424937 ZNF189O75820 626 aaPredicted RBP22.23■■□□□ 1.15
PTCHD3P2-201ENST00000424937 ANXA9O76027 345 aa22.23■■□□□ 1.15
PTCHD3P2-201ENST00000424937 PYGLP06737 847 aa22.23■■□□□ 1.15
PTCHD3P2-201ENST00000424937 ACP1P24666 158 aa22.23■■□□□ 1.15
PTCHD3P2-201ENST00000424937 SIRPB2Q5JXA9 342 aa22.23■■□□□ 1.15
PTCHD3P2-201ENST00000424937 TRIM74Q86UV6 250 aa22.23■■□□□ 1.15
PTCHD3P2-201ENST00000424937 FAM181AQ8N9Y4 354 aa22.23■■□□□ 1.15
PTCHD3P2-201ENST00000424937 ANP32BQ92688 251 aaKnown RBP22.23■■□□□ 1.15
PTCHD3P2-201ENST00000424937 GORASP1Q9BQQ3 440 aa22.23■■□□□ 1.15
PTCHD3P2-201ENST00000424937 FRMD8Q9BZ67 464 aaPredicted RBP22.23■■□□□ 1.15
PTCHD3P2-201ENST00000424937 FAM83DQ9H4H8 585 aa22.23■■□□□ 1.15
PTCHD3P2-201ENST00000424937 USP29Q9HBJ7 922 aa22.23■■□□□ 1.15
PTCHD3P2-201ENST00000424937 EVA1BQ9NVM1 165 aa22.23■■□□□ 1.15
PTCHD3P2-201ENST00000424937 SPO11Q9Y5K1 396 aa22.23■■□□□ 1.15
PTCHD3P2-201ENST00000424937 RP1P56715 2156 aa22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 ZNF106Q9H2Y7 1883 aaKnown RBP22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 ASXL3Q9C0F0 2248 aa22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 LY6G6EA0A0G2JKS1 128 aa22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 INPP4BO15327 924 aa22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 YY2O15391 372 aa22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 EPOP01588 193 aa22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 CKMT1AP12532 417 aa22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 C6orf132Q5T0Z8 1188 aa22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 HENMT1Q5T8I9 393 aaKnown RBP22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 ALS2CLQ60I27 953 aa22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 NLRP8Q86W28 1048 aa22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 GKN2Q86XP6 184 aa22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 FAM71DQ8N9W8 422 aa22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 SLC35B2Q8TB61 432 aa22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 ATG4AQ8WYN0 398 aa22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 EID2BQ96D98 161 aa22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 WDR24Q96S15 920 aa22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 SRPK1Q96SB4 655 aaKnown RBP22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 FICDQ9BVA6 458 aa22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 CARD9Q9H257 536 aa22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 CARS2Q9HA77 564 aaKnown RBP22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 U3KQA8 63 aa22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 CEP295Q9C0D2 2601 aa22.22■■□□□ 1.15
PTCHD3P2-201ENST00000424937 TPRP12270 2363 aaKnown RBP22.21■■□□□ 1.15
PTCHD3P2-201ENST00000424937 RGSL1A5PLK6 1076 aa22.21■■□□□ 1.15
PTCHD3P2-201ENST00000424937 CEACAM5P06731 702 aa22.21■■□□□ 1.15
PTCHD3P2-201ENST00000424937 HLA-DPA1P20036 260 aa22.21■■□□□ 1.15
PTCHD3P2-201ENST00000424937 GNPDA1P46926 289 aa22.21■■□□□ 1.15
PTCHD3P2-201ENST00000424937 ILKQ13418 452 aa22.21■■□□□ 1.15
PTCHD3P2-201ENST00000424937 PRPSAP1Q14558 356 aa22.21■■□□□ 1.15
PTCHD3P2-201ENST00000424937 SLC1A5Q15758 541 aa22.21■■□□□ 1.15
PTCHD3P2-201ENST00000424937 TMC3Q7Z5M5 1100 aa22.21■■□□□ 1.15
PTCHD3P2-201ENST00000424937 SLC13A5Q86YT5 568 aaPredicted RBP22.21■■□□□ 1.15
PTCHD3P2-201ENST00000424937 SCG3Q8WXD2 468 aaKnown RBP22.21■■□□□ 1.15
PTCHD3P2-201ENST00000424937 GLMNQ92990 594 aa22.21■■□□□ 1.15
PTCHD3P2-201ENST00000424937 HIC2Q96JB3 615 aa22.21■■□□□ 1.15
PTCHD3P2-201ENST00000424937 TMEM121Q9BTD3 319 aa22.21■■□□□ 1.15
PTCHD3P2-201ENST00000424937 TMEM168Q9H0V1 697 aa22.21■■□□□ 1.15
PTCHD3P2-201ENST00000424937 CHD8Q9HCK8 2581 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms