RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 GPRIN2O60269 458 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 CACNG3O60359 315 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 MTX2O75431 263 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 ZNF254O75437 659 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 FLOT1O75955 427 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 AKAP3O75969 853 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 RHOBTB1O94844 696 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 SCAF4O95104 1147 aaKnown RBP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 FGFR1OPO95684 399 aaKnown RBP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 CHEK2O96017 543 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 AK1P00568 194 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 GASTP01350 101 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 KLKB1P03952 638 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 GBAP04062 536 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 CYP1A2P05177 515 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 S100A6P06703 90 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 ENO1P06733 434 aaKnown RBP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 SRPRAP08240 638 aaKnown RBP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 PIM1P11309 404 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 AREGP15514 252 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 CHN1P15882 459 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 TRIM21P19474 475 aaKnown RBP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 DNAJB1P25685 340 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 PSMA5P28066 241 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 CCR1P32246 355 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 LONP1P36776 959 aaKnown RBP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 CCT6AP40227 531 aaKnown RBP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 PCP4P48539 62 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 GZMKP49863 264 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 PRRX1P54821 245 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 FAM189BP81408 668 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 DUSP2Q05923 314 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 GFPT1Q06210 699 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 PLD1Q13393 1074 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 MRPL49Q13405 166 aaKnown RBP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 RAPSNQ13702 412 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 WDR43Q15061 677 aaKnown RBP eCLIP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 ZMYND11Q15326 602 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 CNGA3Q16281 694 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 TAZQ16635 292 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 CYP2A13Q16696 494 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 ERCC6LQ2NKX8 1250 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 CCDC57Q2TAC2 916 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 ASTE1Q2TB18 679 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 LEXMQ3ZCV2 418 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 CCDC152Q4G0S7 254 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 KCTD21Q4G0X4 260 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 PLA1AQ53H76 456 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 RUNDC3AQ59EK9 446 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 CFAP157Q5JU67 520 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 LY6G5CQ5SRR4 150 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 STXBP5Q5T5C0 1151 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 MANEALQ5VSG8 457 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 DAB2IPQ5VWQ8 1189 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 ANKS6Q68DC2 871 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 KIAA0930Q6ICG6 404 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 TMEM81Q6P7N7 255 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 KCNV1Q6PIU1 500 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 TOM1L2Q6ZVM7 507 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 SEM1Q6ZVN7 128 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 DOK3Q7L591 496 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 GSTA5Q7RTV2 222 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 ZNF551Q7Z340 670 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 SLC46A3Q7Z3Q1 461 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 SPATA21Q7Z572 469 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 AKNAQ7Z591 1439 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 BATF2Q8N1L9 274 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 AADATQ8N5Z0 425 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 BANPQ8N9N5 519 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 SLC24A4Q8NFF2 622 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 OR52N2Q8NGI0 321 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 MBD3L2Q8NHZ7 208 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 MDM1Q8TC05 714 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 PROKR1Q8TCW9 393 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 ARHGAP45Q92619 1136 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 FBXL20Q96IG2 436 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 PIWIL1Q96J94 861 aaKnown RBP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 LRIG1Q96JA1 1093 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 C8orf76Q96K31 380 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 NSMCE2Q96MF7 247 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 WDFY2Q96P53 400 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 NAP1L3Q99457 506 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 ZBTB18Q99592 522 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 HNRNPABQ99729 332 aaKnown RBP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 SEMA3CQ99985 751 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 PAAF1Q9BRP4 392 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 MECRQ9BV79 373 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 MLST8Q9BVC4 326 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 SLC46A2Q9BY10 475 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 HRH4Q9H3N8 390 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 LDAHQ9H6V9 325 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 AKIRIN1Q9H9L7 192 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-205ENST00000424674 POLR1BQ9H9Y6 1135 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 GPR35Q9HC97 309 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 IL20Q9NYY1 176 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 MOCS1Q9NZB8 636 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 HDAC6Q9UBN7 1215 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 DNAJB11Q9UBS4 358 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 BAIAP2L1Q9UHR4 511 aa3.74□□□□□ -1.81
SF3B1-205ENST00000424674 IPO11Q9UI26 975 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms