RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 ALG9Q9H6U8 611 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 AGPAT4Q9NRZ5 378 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 TMEM39AQ9NV64 488 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 ARMC1Q9NVT9 282 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 CMTM6Q9NX76 183 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 FBXO5Q9UKT4 447 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 TRHDEQ9UKU6 1024 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 TRIM64CA6NLI5 447 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 F8W810 466 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 K7EPI3 171 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 PIRO00625 290 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 CLOCKO15516 846 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 GPX3P22352 226 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 CD151P48509 253 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 GATMP50440 423 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 FOXA1P55317 472 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 GRB7Q14451 532 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 PCSK7Q16549 785 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 UGT3A2Q3SY77 523 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 PDZD4Q76G19 769 aaPredicted RBP14.33□□□□□ -0.12
MSH5-206ENST00000423982 TMCO2Q7Z6W1 182 aaPredicted RBP14.33□□□□□ -0.12
MSH5-206ENST00000423982 PIM3Q86V86 326 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 CAMK1DQ8IU85 385 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 NAT16Q8N8M0 369 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 KCNA7Q96RP8 456 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 SIK2Q9H0K1 926 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 FAM124BQ9H5Z6 455 aaPredicted RBP14.33□□□□□ -0.12
MSH5-206ENST00000423982 AKTIPQ9H8T0 292 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 MRPL40Q9NQ50 206 aaKnown RBP14.33□□□□□ -0.12
MSH5-206ENST00000423982 FBXW11Q9UKB1 542 aa14.33□□□□□ -0.12
MSH5-206ENST00000423982 SCN5AQ14524 2016 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 A0A0U1RQF3 1178 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 KANSL1LA0AUZ9 987 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 ACOX3O15254 700 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 SNAP29O95721 258 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 HMOX2P30519 316 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 RXRGP48443 463 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 GNA12Q03113 381 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 SFSWAPQ12872 951 aaKnown RBP14.32□□□□□ -0.12
MSH5-206ENST00000423982 FAM26DQ5JW98 314 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 TMEM207Q6UWW9 146 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 ZC3H7AQ8IWR0 971 aaKnown RBP14.32□□□□□ -0.12
MSH5-206ENST00000423982 CNTN4Q8IWV2 1026 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 MFSD2AQ8NA29 543 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 MAGEE2Q8TD90 523 aaPredicted RBP14.32□□□□□ -0.12
MSH5-206ENST00000423982 SGCDQ92629 289 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 HDAC10Q969S8 669 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 BRD8Q9H0E9 1235 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 TBC1D23Q9NUY8 699 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 TBCCD1Q9NVR7 557 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 NSMCE4AQ9NXX6 385 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 COQ6Q9Y2Z9 468 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 TIMM13Q9Y5L4 95 aaPredicted RBP14.32□□□□□ -0.12
MSH5-206ENST00000423982 FXYD1O00168 92 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 KCNH1O95259 989 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 SIX3O95343 332 aaPredicted RBP14.32□□□□□ -0.12
MSH5-206ENST00000423982 MATN1P21941 496 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 BMXP51813 675 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 C21orf59P57076 290 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 DNAJB13P59910 316 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 RELAQ04206 551 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 TRAF2Q12933 501 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 UGP2Q16851 508 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 PYCR3Q53H96 274 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 WSCD1Q658N2 575 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 DCDC5Q6ZRR9 648 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 COLEC11Q9BWP8 271 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 C11orf49Q9H6J7 331 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 HCSTQ9UBK5 93 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 FADS3Q9Y5Q0 445 aa14.32□□□□□ -0.12
MSH5-206ENST00000423982 FUOMA2VDF0 154 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 TMEM221A6NGB7 291 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 INPP4BO15327 924 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 RPLP2P05387 115 aaKnown RBP14.31□□□□□ -0.12
MSH5-206ENST00000423982 ITGB8P26012 769 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 CXCR3P49682 368 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 CCT8P50990 548 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 CLCNKBP51801 687 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 MLLT10P55197 1068 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 RABL3Q5HYI8 236 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 GPR158Q5T848 1215 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 ANKRD26P1Q6NSI1 321 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 FAM117BQ6P1L5 589 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 TBPL2Q6SJ96 375 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 ADGRG5Q8IZF4 528 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 CENPSQ8N2Z9 138 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 C2CD4AQ8NCU7 369 aaPredicted RBP14.31□□□□□ -0.12
MSH5-206ENST00000423982 DNAJB14Q8TBM8 379 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 STON2Q8WXE9 905 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 PPP1R14BQ96C90 147 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 C19orf60Q96EN9 201 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 COX4I2Q96KJ9 171 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 HNRNPABQ99729 332 aaKnown RBP14.31□□□□□ -0.12
MSH5-206ENST00000423982 NDFIP2Q9NV92 336 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 CDH7Q9ULB5 785 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 UBQLN1Q9UMX0 589 aaKnown RBP14.31□□□□□ -0.12
MSH5-206ENST00000423982 TCAF1Q9Y4C2 921 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 CHD7Q9P2D1 2997 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 A0A1B0GTL3 188 aa14.31□□□□□ -0.12
MSH5-206ENST00000423982 ARPC2O15144 300 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms