RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 SEPT3Q9UH03 358 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 BTRCQ9Y297 605 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 LOC285556D6RIA3 1793 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 KDM1AO60341 852 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 HTR1AP08908 422 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 DIO3P55073 304 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 IMPG1Q17R60 797 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 SLC16A12Q6ZSM3 486 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 KRT27Q7Z3Y8 459 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 PIM3Q86V86 326 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 PDZD8Q8NEN9 1154 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 FKBP10Q96AY3 582 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 RNF145Q96MT1 663 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 CHID1Q9BWS9 393 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 PLEKHA5Q9HAU0 1116 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 SLC52A3Q9NQ40 469 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 TREX1Q9NSU2 369 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 ZNF639Q9UID6 485 aa16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 OAS3Q9Y6K5 1087 aaKnown RBP16.65■□□□□ 0.26
NPC1L1-203ENST00000423141 TSC2P49815 1807 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 ASPDHA6ND91 283 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 CLDN25C9JDP6 229 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 DFFAO00273 331 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 ABCB7O75027 752 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 LRIG2O94898 1065 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 CASP2P42575 452 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 GALNT1Q10472 559 aaPredicted RBP16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 ZBTB6Q15916 424 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 KYAT1Q16773 422 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 FBXO47Q5MNV8 452 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 LBX2Q6XYB7 198 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 SPARTQ8N0X7 666 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 GOLM1Q8NBJ4 401 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 NSUN5Q96P11 429 aaKnown RBP16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 VAT1Q99536 393 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 TUBB1Q9H4B7 451 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 DDIT4Q9NX09 232 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 VPS51Q9UID3 782 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 ZNF112Q9UJU3 913 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 FBXW11Q9UKB1 542 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 ITGB1BP2Q9UKP3 347 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 PCDHGA11Q9Y5H2 935 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 MCM3APO60318 1980 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 A0A1B0GTL3 188 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 CCL22O00626 93 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 LINC00032P0C843 101 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 CRHBPP24387 322 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 HTR1BP28222 390 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 NFYCQ13952 458 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 POLD3Q15054 466 aaPredicted RBP16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 PGS1Q32NB8 556 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 PAGE3Q5JUK9 113 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 CRTC3Q6UUV7 619 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 OSTM1Q86WC4 334 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 TBC1D21Q8IYX1 336 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 LRRC52Q8N7C0 313 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 FLAD1Q8NFF5 587 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 TWIST2Q8WVJ9 160 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 BIRC7Q96CA5 298 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 UBXN10Q96LJ8 280 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 DUSP16Q9BY84 665 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 NTN4Q9HB63 628 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 MID1IP1Q9NPA3 183 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 SPATA7Q9P0W8 599 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 OR12D3Q9UGF7 316 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 EVLQ9UI08 416 aaPredicted RBP16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 PLXNA1Q9UIW2 1896 aa16.64■□□□□ 0.25
NPC1L1-203ENST00000423141 A8MU76 341 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 CDK14O94921 469 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 RBP1P09455 135 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 PABPC1P11940 636 aaKnown RBP16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 PCNAP12004 261 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 HGFP14210 728 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 AKAP5P24588 427 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 HRH2P25021 359 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 CDKN2DP55273 166 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 MAP3K7CLP57077 242 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 PAQR9Q6ZVX9 377 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 DSG4Q86SJ6 1040 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 KIAA2013Q8IYS2 634 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 CLYBLQ8N0X4 340 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 B3GALNT2Q8NCR0 500 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 BEST2Q8NFU1 509 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 OR52K2Q8NGK3 314 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 ZFP90Q8TF47 636 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 STARD8Q92502 1023 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 PTERQ96BW5 349 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 TUBGCP3Q96CW5 907 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 ULBP1Q9BZM6 244 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 TXNP10599 105 aaKnown RBP16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 RCVRNP35243 200 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 ARSFP54793 590 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 SCAPQ12770 1279 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 ACAP2Q15057 778 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 KCNJ8Q15842 424 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 DPY19L1Q2PZI1 675 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 HECTD2Q5U5R9 776 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 DCAF15Q66K64 600 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 CLEC20AQ6ZU45 233 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms