RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 TPSB2P20231 275 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 SPINT3P49223 89 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 C21orf59P57076 290 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 BNC1Q01954 994 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 CDH17Q12864 832 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 DHX34Q14147 1143 aaKnown RBP9.25□□□□□ -0.93
PDGFC-202ENST00000422544 KCNJ11Q14654 390 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 POU6F1Q14863 301 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 TAF1AQ15573 450 aaPredicted RBP9.25□□□□□ -0.93
PDGFC-202ENST00000422544 TPSAB1Q15661 275 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 CSRP2Q16527 193 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 KIF19Q2TAC6 998 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 CERCAMQ5T4B2 595 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 ALS2CLQ60I27 953 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 PNCKQ6P2M8 343 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 SLC23A3Q6PIS1 610 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 GLT6D1Q7Z4J2 308 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 RABEPKQ7Z6M1 372 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 ABI3BPQ7Z7G0 1075 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 NRSN1Q8IZ57 195 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 TTC30BQ8N4P2 665 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 OR13H1Q8NG92 308 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 BRSK1Q8TDC3 778 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 AP2M1Q96CW1 435 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 AGAP2Q99490 1192 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 TRIM51Q9BSJ1 452 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 RIOK2Q9BVS4 552 aaKnown RBP9.25□□□□□ -0.93
PDGFC-202ENST00000422544 FAM83DQ9H4H8 585 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 CAPN10Q9HC96 672 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 CASS4Q9NQ75 786 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 SEMA4GQ9NTN9 838 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.25□□□□□ -0.93
PDGFC-202ENST00000422544 PKD2L2Q9NZM6 624 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 HACD3Q9P035 362 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 ANKRD6Q9Y2G4 727 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 OR1A2Q9Y585 309 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 TRPM6Q9BX84 2022 aa9.25□□□□□ -0.93
PDGFC-202ENST00000422544 RGSL1A5PLK6 1076 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 FAM187AA6NFU0 413 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 C2orf81A6NN90 581 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 A6NNZ2 444 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 GOLGA8MH3BSY2 632 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 STX7O15400 261 aaKnown RBP9.24□□□□□ -0.93
PDGFC-202ENST00000422544 RAD51CO43502 376 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 LDB2O43679 373 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 ZNF500O60304 480 aaPredicted RBP9.24□□□□□ -0.93
PDGFC-202ENST00000422544 TMEM63AO94886 807 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 CRTAMO95727 393 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 THEGLP0DJG4 465 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 LPOP22079 712 aaPredicted RBP9.24□□□□□ -0.93
PDGFC-202ENST00000422544 IVDP26440 423 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 HMGCLP35914 325 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 MAGEA6P43360 314 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 GPR1P46091 355 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 RABIFP47224 123 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 SESN2P58004 480 aaPredicted RBP9.24□□□□□ -0.93
PDGFC-202ENST00000422544 NXPH1P58417 271 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 PFN3P60673 137 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 TMPRSS15P98073 1019 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 CDK16Q00536 496 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 GRIK2Q13002 908 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 MTM1Q13496 603 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 SEPT6Q14141 434 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 CCDC38Q502W7 563 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 PRAMEF14Q5SWL7 426 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 TPRG1LQ5T0D9 272 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 RNASEH2BQ5TBB1 312 aaKnown RBP9.24□□□□□ -0.93
PDGFC-202ENST00000422544 RAET1GQ6H3X3 334 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 ESRP1Q6NXG1 681 aaKnown RBP9.24□□□□□ -0.93
PDGFC-202ENST00000422544 LRRC8BQ6P9F7 803 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 KYAT3Q6YP21 454 aaKnown RBP9.24□□□□□ -0.93
PDGFC-202ENST00000422544 MAATS1Q7Z4T9 603 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 PTAR1Q7Z6K3 402 aaPredicted RBP9.24□□□□□ -0.93
PDGFC-202ENST00000422544 IQCHQ86VS3 1027 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 NLRP8Q86W28 1048 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 SPATS2Q86XZ4 545 aaKnown RBP9.24□□□□□ -0.93
PDGFC-202ENST00000422544 RAVER1Q8IY67 606 aaKnown RBP9.24□□□□□ -0.93
PDGFC-202ENST00000422544 GPR26Q8NDV2 337 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 SKA1Q96BD8 255 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 APOOQ9BUR5 198 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 GTPBP2Q9BX10 602 aaKnown RBP9.24□□□□□ -0.93
PDGFC-202ENST00000422544 NUSAP1Q9BXS6 441 aaKnown RBP9.24□□□□□ -0.93
PDGFC-202ENST00000422544 TRIM31Q9BZY9 425 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 KCTD5Q9NXV2 234 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 IL17CQ9P0M4 197 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 FNDC3AQ9Y2H6 1198 aaKnown RBP9.24□□□□□ -0.93
PDGFC-202ENST00000422544 SNX24Q9Y343 169 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 PKP3Q9Y446 797 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 SNX11Q9Y5W9 270 aa9.24□□□□□ -0.93
PDGFC-202ENST00000422544 HELZ2Q9BYK8 2649 aaKnown RBP9.23□□□□□ -0.93
PDGFC-202ENST00000422544 ANKRD36A6QL64 1941 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 LNP1A1A4G5 178 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 CCDC78A2IDD5 438 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 DCDC2BA2VCK2 349 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 CTAGE15A4D2H0 777 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 EFCAB8A8MWE9 144 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 ARHGAP33O14559 1287 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 DNALI1O14645 258 aaPredicted RBP9.23□□□□□ -0.93
PDGFC-202ENST00000422544 MAGEC1O60732 1142 aa9.23□□□□□ -0.93
PDGFC-202ENST00000422544 LRP3O75074 770 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms